HHsearch alignment for GI: 254781047 and conserved domain: KOG2004

>KOG2004 consensus.
Probab=95.17  E-value=0.28  Score=28.21  Aligned_cols=122  Identities=21%  Similarity=0.307  Sum_probs=74.5

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH----HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             886499888887728999999998578111468889999----9999999999713112246655780789999996138
Q gi|254781047|r   65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEF----MKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALES  140 (404)
Q Consensus        65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~F----M~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~  140 (404)
T Consensus       437 qGkIlCf~GPPGVGKTSI~kSIA~ALn--Rk----FfRfSvGG~tDvA-eIkGHRRTYVGAM---PGkiIq~LK~v~t~N  506 (906)
T KOG2004         437 QGKILCFVGPPGVGKTSIAKSIARALN--RK----FFRFSVGGMTDVA-EIKGHRRTYVGAM---PGKIIQCLKKVKTEN  506 (906)
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHC--CC----EEEEECCCCCCHH-HHCCCCEEEECCC---CHHHHHHHHHHCCCC
T ss_conf             883799868998773218999999848--74----6998536634277-6425421100148---848999998617788


Q ss_pred             CEEEEEEE------EECCCHHHHHH-------HHHHHHHHH-----CCCEEEEECCCC---HHHHHCCCCCHHHHHHHHH
Q ss_conf             79998423------20471358889-------999999985-----496899817868---6775238740566898999
Q gi|254781047|r  141 RVLCFDEF------MITNIADAIIL-------SRLFAALFS-----HGCIIVMTSNFI---PENLYKDEINRNVLVSFIE  199 (404)
Q Consensus       141 ~lLCfDEF------~V~DiaDAmil-------~rl~~~lf~-----~gv~lV~TSN~~---P~dLY~~GLqR~~FlPfI~  199 (404)
T Consensus       507 PliLiDEvDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFicTAN~idtIP~-----------------  569 (906)
T KOG2004         507 PLILIDEVDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVIDTIPP-----------------  569 (906)
T ss_pred             CEEEEEHHHHHCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCHHHEEEEEECCCCCCCCH-----------------
T ss_conf             658853223417887798689998743965355345420266421110688985364456985-----------------


Q ss_pred             HHHHCCEEEECCCC
Q ss_conf             99850508980473
Q gi|254781047|r  200 LLEKKLEIISLDSG  213 (404)
Q Consensus       200 ~lk~~~~V~~l~~~  213 (404)
T Consensus       570 pLlDRMEvIelsGY  583 (906)
T KOG2004         570 PLLDRMEVIELSGY  583 (906)
T ss_pred             HHHHHHHEEECCCC
T ss_conf             66412232203672