HHsearch alignment for GI: 254781047 and conserved domain: KOG2004
>KOG2004 consensus.
Probab=95.17 E-value=0.28 Score=28.21 Aligned_cols=122 Identities=21% Similarity=0.307 Sum_probs=74.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH----HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 886499888887728999999998578111468889999----9999999999713112246655780789999996138
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEF----MKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALES 140 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~F----M~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~ 140 (404)
T Consensus 437 qGkIlCf~GPPGVGKTSI~kSIA~ALn--Rk----FfRfSvGG~tDvA-eIkGHRRTYVGAM---PGkiIq~LK~v~t~N 506 (906)
T KOG2004 437 QGKILCFVGPPGVGKTSIAKSIARALN--RK----FFRFSVGGMTDVA-EIKGHRRTYVGAM---PGKIIQCLKKVKTEN 506 (906)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHC--CC----EEEEECCCCCCHH-HHCCCCEEEECCC---CHHHHHHHHHHCCCC
T ss_conf 883799868998773218999999848--74----6998536634277-6425421100148---848999998617788
Q ss_pred CEEEEEEE------EECCCHHHHHH-------HHHHHHHHH-----CCCEEEEECCCC---HHHHHCCCCCHHHHHHHHH
Q ss_conf 79998423------20471358889-------999999985-----496899817868---6775238740566898999
Q gi|254781047|r 141 RVLCFDEF------MITNIADAIIL-------SRLFAALFS-----HGCIIVMTSNFI---PENLYKDEINRNVLVSFIE 199 (404)
Q Consensus 141 ~lLCfDEF------~V~DiaDAmil-------~rl~~~lf~-----~gv~lV~TSN~~---P~dLY~~GLqR~~FlPfI~ 199 (404)
T Consensus 507 PliLiDEvDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFicTAN~idtIP~----------------- 569 (906)
T KOG2004 507 PLILIDEVDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVIDTIPP----------------- 569 (906)
T ss_pred CEEEEEHHHHHCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCHHHEEEEEECCCCCCCCH-----------------
T ss_conf 658853223417887798689998743965355345420266421110688985364456985-----------------
Q ss_pred HHHHCCEEEECCCC
Q ss_conf 99850508980473
Q gi|254781047|r 200 LLEKKLEIISLDSG 213 (404)
Q Consensus 200 ~lk~~~~V~~l~~~ 213 (404)
T Consensus 570 pLlDRMEvIelsGY 583 (906)
T KOG2004 570 PLLDRMEVIELSGY 583 (906)
T ss_pred HHHHHHHEEECCCC
T ss_conf 66412232203672