HHsearch alignment for GI: 254781047 and conserved domain: PRK00149
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=99.18 E-value=2.9e-10 Score=85.20 Aligned_cols=104 Identities=20% Similarity=0.250 Sum_probs=78.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 6499888887728999999998578----111468889999999999999971311224665578078999999613879
Q gi|254781047|r 67 QGIYLHGDVGQGKSMLMNLFFALVP----IEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRV 142 (404)
Q Consensus 67 kGlYL~G~VG~GKT~LMdlFy~~l~----~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~l 142 (404)
T Consensus 146 NPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~tae~F~~~~v~al~---~----------~~~~~Fr~~y-r~~Dv 211 (447)
T PRK00149 146 NPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSSEKFTNDFVKALR---N----------NAMEEFKEKY-RSVDV 211 (447)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH---C----------CCHHHHHHHH-HCCCE
T ss_conf 85589779988788999999999998589972899549999999999985---1----------8699999999-72885
Q ss_pred EEEEEEEECCCHHH--HHHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf 99842320471358--8899999999854968998178686775
Q gi|254781047|r 143 LCFDEFMITNIADA--IILSRLFAALFSHGCIIVMTSNFIPENL 184 (404)
Q Consensus 143 LCfDEF~V~DiaDA--mil~rl~~~lf~~gv~lV~TSN~~P~dL 184 (404)
T Consensus 212 LliDDiqfl~gk~~tqeeff~~fn~l~~~~kqiv~tsd~~P~~l 255 (447)
T PRK00149 212 LLIDDIQFLAGKEKTQEEFFHTFNALHENNKQIVITSDRPPKEL 255 (447)
T ss_pred EEECHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHC
T ss_conf 43214888605577999999999999984996899578896765