HHsearch alignment for GI: 254781047 and conserved domain: PRK05022
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional.
Probab=95.08 E-value=0.088 Score=31.37 Aligned_cols=120 Identities=17% Similarity=0.126 Sum_probs=67.9
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH-----HHHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 68864998888877289999999985781114688899-----9999999999997-13112246655780789999996
Q gi|254781047|r 64 CSMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFY-----EFMKDVHSRIIMY-RKKIEFGEILESDPIPLVASSIA 137 (404)
Q Consensus 64 ~~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh-----~FM~~ih~~l~~~-~~~~~~~~~~~~dpl~~va~~l~ 137 (404)
T Consensus 207 ~sd~pVLI~GEtGTGKelvAr~IH~~S~R~~~Pfv~vNCaalpe~l--~EseLFGh~kGaFtGA-~~~r~G~--f--e~A 279 (510)
T PRK05022 207 ASDLNVLITGETGVGKELVARAIHQASPRAVKPLVYLNCAALPESL--AESELFGHVKGAFTGA-ISNRSGK--F--ELA 279 (510)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH--HHHHHCCCCCCCCCCC-CCCCCCC--E--EEC
T ss_conf 8999889889898139999999996688789985788899998567--8998659777886886-5567881--0--177
Q ss_pred CCCCEEEEEEEEECCCHHHHHHHHHHHHHHH-------------CCCEEEEECCCCHHHHHCCCCCHHHH
Q ss_conf 1387999842320471358889999999985-------------49689981786867752387405668
Q gi|254781047|r 138 LESRVLCFDEFMITNIADAIILSRLFAALFS-------------HGCIIVMTSNFIPENLYKDEINRNVL 194 (404)
Q Consensus 138 ~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~-------------~gv~lV~TSN~~P~dLY~~GLqR~~F 194 (404)
T Consensus 280 ~g-GTLfLDEI~~--Lpl~~-Q~KLLrvLq~g~iqrvG~~~~~~vdvRIIAATnrdL~~~V~~G~FR~DL 345 (510)
T PRK05022 280 DG-GTLFLDEIGE--LPLAL-QAKLLRVLQYGEIQRVGSDRSLRVDVRVIAATNRDLREEVLAGRFRADL 345 (510)
T ss_pred CC-CEEEEECHHH--CCHHH-HHHHHHHHHCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHCCCHHHHH
T ss_conf 89-8798757454--99999-9999999847958855899466666899960783599998839638999