HHsearch alignment for GI: 254781047 and conserved domain: PRK05564
>PRK05564 DNA polymerase III subunit delta'; Validated.
Probab=90.82 E-value=0.9 Score=24.95 Aligned_cols=121 Identities=16% Similarity=0.182 Sum_probs=74.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH-----HCCC
Q ss_conf 86499888887728999999998578111468889999999999999971311224665578078999999-----6138
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI-----ALES 140 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l-----~~~~ 140 (404)
T Consensus 26 ~HAyLF~Gp~G~GK~~~A~~~A~~ll~~~~~~~~~-D--------~~~~~~~--~~~~I~vd~IR~l~~~~~~~p~~g~~ 94 (313)
T PRK05564 26 SHASLIVGEDGIGKSILAKEIANKILGKSEQREYV-D--------IIEYKPI--NKKSIGVDDIRNIIEEVNKKPYEGDK 94 (313)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC-C--------EEEEECC--CCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 75043279998509999999999982899778898-6--------5886332--25699989999999998408625895
Q ss_pred CEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCC
Q ss_conf 799984232047135888999999998549689981786867752387405668989999985050898047
Q gi|254781047|r 141 RVLCFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDS 212 (404)
Q Consensus 141 ~lLCfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~ 212 (404)
T Consensus 95 KV~II~~ae~m~~~AaNALLKtLEEPP~~t~fIL~t~~--~~~l-------------LpTI~SRCQ~~~f~~ 151 (313)
T PRK05564 95 KVIIIYKSEKMTEQAQNAFLKTIEEPPKGVFIILLCEN--LEQI-------------LDTIKSRCQIYKLNR 151 (313)
T ss_pred EEEEECCHHHHCHHHHHHHHHCCCCCCCCEEEEEEECC--HHHC-------------CCHHHCCCEEEECCC
T ss_conf 69998077775899999984550368998589986498--3547-------------577870653566899