HHsearch alignment for GI: 254781047 and conserved domain: PRK06090
>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=90.32 E-value=0.42 Score=27.05 Aligned_cols=133 Identities=11% Similarity=0.111 Sum_probs=78.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHH-----HH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH--
Q ss_conf 88649988888772899999999857811146-----88-89999999999999971311224665578078999999--
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKC-----RL-HFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI-- 136 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~-----R~-HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l-- 136 (404)
T Consensus 24 l~HA~L~~g~~G~Gk~~la~~la~~LlC~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~pe~~~-k~I~vd~IR~l~~~~~~ 102 (319)
T PRK06090 24 IPGALLLQSDEGLGVESLVELFSHALLCQNYQSEACGFCHSCELMKSGNHPDLHVIKPEKEG-KSITVEQIRQCNRLAQE 102 (319)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCC-CCCCHHHHHHHHHHHHH
T ss_conf 63067667999857999999999998089999998877877999875899982366123356-76879999999999754
Q ss_pred ---HCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCC
Q ss_conf ---61387999842320471358889999999985496899817868677523874056689899999850508980473
Q gi|254781047|r 137 ---ALESRVLCFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDSG 213 (404)
Q Consensus 137 ---~~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~~ 213 (404)
T Consensus 103 ~~~~g~~KV~iI~~ae~m~~~AaNALLKtLEEP-p~~t~fiL~t~~~-~~l-------------l~TI~SRCq~~~l~~p 167 (319)
T PRK06090 103 SSQLGGYRLFVIEPADAMNESASNALLKTLEEP-APNCLFLLVTHNQ-KRL-------------LPTIVSRCQQWVVTPP 167 (319)
T ss_pred CCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCC-CCCEEEEEEECCH-HHC-------------CCCHHHCCCCCCCCCC
T ss_conf 521069369998144434999999999984289-9883899876851-208-------------6418761445028995