HHsearch alignment for GI: 254781047 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=94.26 E-value=0.16 Score=29.70 Aligned_cols=164 Identities=13% Similarity=0.094 Sum_probs=92.7
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 97005899999999748877898999999999999999861354333225664310246666668864998888877289
Q gi|254781047|r 1 MSLDLVSSRLISLIQDKKLKYNPAQESVVKSFDRLLVDLYKQQKQEQGIFSWLWNLRGIKRKYCSMQGIYLHGDVGQGKS 80 (404)
Q Consensus 1 m~~~~~~~~y~~~v~~~~i~~D~~Q~~~i~~L~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kGlYL~G~VG~GKT 80 (404)
T Consensus 1 msy~~la~KYRP~----~F~dvvGQe~vv~~L~nai~~---~---------------------rl~HAyLFsGprG~GKT 52 (560)
T PRK06647 1 MSYRGTATKRRPR----DFNSLEGQDFVVETLKHSIEK---N---------------------KIANAYIFSGPRGVGKT 52 (560)
T ss_pred CCCHHHHHHHCCC----CHHHHCCCHHHHHHHHHHHHC---C---------------------CCCCEEEEECCCCCCHH
T ss_conf 9537777642898----654403949999999999974---9---------------------97743663289987899
Q ss_pred HHHHHHHHHCCCCHHHH-------HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH-----HCCCCEEEEEEE
Q ss_conf 99999998578111468-------889999999999999971311224665578078999999-----613879998423
Q gi|254781047|r 81 MLMNLFFALVPIEKKCR-------LHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI-----ALESRVLCFDEF 148 (404)
Q Consensus 81 ~LMdlFy~~l~~~~K~R-------~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l-----~~~~~lLCfDEF 148 (404)
T Consensus 53 t~ArilAk~LnC~~~~~~~PCg~C~sC~~i~~g~~~DviEidaas---n-~~VddIR~l~e~v~~~P~~~~yKV~IIDEa 128 (560)
T PRK06647 53 SSARAFARCLNCVNGPTIMPCGECFSCKSIDNDSSLDVIEIDGAS---N-TSVQDVRQIKEEIMFPPASSRYRVYIIDEV 128 (560)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCC---C-CCHHHHHHHHHHHCCCCCCCCEEEEEECCH
T ss_conf 999999999659999998888788788887459998757643645---4-888999999998632876687069996465
Q ss_pred EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECC
Q ss_conf 204713588899999999854968998178686775238740566898999998505089804
Q gi|254781047|r 149 MITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLD 211 (404)
Q Consensus 149 ~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~ 211 (404)
T Consensus 129 hmLt~~A~NALLKtLEEPP~~~~FILaTte--~~KI-------------~~TI~SRCQ~f~Fk 176 (560)
T PRK06647 129 HMLSNSAFNALLKTIEEPPPYIVFIFATTE--VHKL-------------PATIKSRCQHFNFR 176 (560)
T ss_pred HHCCHHHHHHHHHHHHCCCCCEEEEEECCC--HHHC-------------HHHHHHHHEEEECC
T ss_conf 655999999999986348875599997799--4768-------------48999651041055