HHsearch alignment for GI: 254781047 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=95.07 E-value=0.26 Score=28.37 Aligned_cols=89 Identities=21% Similarity=0.214 Sum_probs=62.8
Q ss_pred CCCCCHHHHHHH--------HCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHH
Q ss_conf 111019998521--------024689999985378899818987872463899989999999822898289980789788
Q gi|254781047|r 274 VSRFSFFDLCDR--------PLSANDFVEIANRFDVVIINDIPLLKEDRKDWIKRFIMLIDVFYEHKIGLIISSEENIED 345 (404)
Q Consensus 274 va~f~F~eLC~~--------~lg~~DYi~Ia~~f~ti~I~~VP~l~~~~~d~arRFI~LID~lYd~kv~Li~sa~~~~~~ 345 (404)
T Consensus 214 Viy~ta~~L~~~l~~~~~~~~~~~~~~~~~l~~~DLLIIDDLG~E~~-t~~~~~~Lf~iIN~R~~~~k~tIITTNl~~~e 292 (330)
T PRK06835 214 VIYRTSDELIENLREIRFNNDNDAPELEDLLINCDLLIIDDLGTESI-TEFSKTELFNLINKRLLMNKKMIISTNLSLEE 292 (330)
T ss_pred EEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEECCCCHHH
T ss_conf 99962999999999975457644899999996189899721034558-86899999999999986799979988999899
Q ss_pred HCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 0134676531348998988745242
Q gi|254781047|r 346 LFPYKLRKGAFEIQRTVSRLYEMFS 370 (404)
Q Consensus 346 L~~~~~~~~~F~f~Rt~SRL~EMqS 370 (404)
T Consensus 293 L~~------~-y~eRi~SRi~~~~~ 310 (330)
T PRK06835 293 LLK------T-YSERIASRLLGNFT 310 (330)
T ss_pred HHH------H-HHHHHHHHHHHCCE
T ss_conf 999------8-74899999981854