HHsearch alignment for GI: 254781047 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=93.99 E-value=0.52 Score=26.45 Aligned_cols=126 Identities=17% Similarity=0.249 Sum_probs=72.8
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHHHHHHHH------HCC-------------CCC
Q ss_conf 86499888887728999999998578111------46888999999999999997------131-------------122
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVPIEK------KCRLHFYEFMKDVHSRIIMY------RKK-------------IEF 120 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~~~------K~R~HFh~FM~~ih~~l~~~------~~~-------------~~~ 120 (404)
T Consensus 26 ~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri-----~~~nHPDl~~i~P~~~~~g~~~~~~~~~~~~~~~~~ 100 (314)
T PRK07399 26 APAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRL-----EEGNHPDLLWVEPTYQHQGKLITASEAEEAGLKRKS 100 (314)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH-----HCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 744877899983299999999999857899997665587-----518999778860562003454557789876530268
Q ss_pred CCCCCCCHHHHHHHHH-----HCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHH
Q ss_conf 4665578078999999-----61387999842320471358889999999985496899817868677523874056689
Q gi|254781047|r 121 GEILESDPIPLVASSI-----ALESRVLCFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLV 195 (404)
Q Consensus 121 ~~~~~~dpl~~va~~l-----~~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~Fl 195 (404)
T Consensus 101 ~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~AaNaLLKtLEE-P~~~~fILit~~--~~~l----------- 166 (314)
T PRK07399 101 PPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEAAANALLKTLEE-PGNGTLILIAPS--PESL----------- 166 (314)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCC-CCCCEEEEEECC--HHHC-----------
T ss_conf 77787999999999973188568847999889787199999999986147-878569999799--3649-----------
Q ss_pred HHHHHHHHCCEEEECCC
Q ss_conf 89999985050898047
Q gi|254781047|r 196 SFIELLEKKLEIISLDS 212 (404)
Q Consensus 196 PfI~~lk~~~~V~~l~~ 212 (404)
T Consensus 167 --LpTI~SRCQ~i~F~~ 181 (314)
T PRK07399 167 --LPTIVSRCQIIPFYR 181 (314)
T ss_pred --CHHHHCCCEEEECCC
T ss_conf --146641875633899