HHsearch alignment for GI: 254781047 and conserved domain: PRK08058
>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=92.06 E-value=0.62 Score=25.97 Aligned_cols=129 Identities=11% Similarity=0.166 Sum_probs=73.9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCHHH------HHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH--
Q ss_conf 8649988888772899999999857811146------888-9999999999999971311224665578078999999--
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVPIEKKC------RLH-FYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI-- 136 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~------R~H-Fh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l-- 136 (404)
T Consensus 28 ~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~HPD~~~i~p~---~~~i~idqiR~L~~~~~~ 104 (329)
T PRK08058 28 AHAYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGNHPDVHLVAPD---GQSIKKDQIRYLKEEFSK 104 (329)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCC---CCCCCHHHHHHHHHHHCC
T ss_conf 61565578999889999999999973999999998878889999876999976774566---140779999999999643
Q ss_pred ---HCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCC
Q ss_conf ---6138799984232047135888999999998549689981786867752387405668989999985050898047
Q gi|254781047|r 137 ---ALESRVLCFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDS 212 (404)
Q Consensus 137 ---~~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~ 212 (404)
T Consensus 105 ~p~~g~~KV~II~~Ae~m~~~AaNALLKtLEEPp~~t~fIL~t~~--~~~l-------------LpTI~SRCq~i~f~~ 168 (329)
T PRK08058 105 SGVESNKKVYIIEHADKMTASAANSLLKFLEEPSGDTTAILLTEN--KHQI-------------LPTILSRCQVVEFRP 168 (329)
T ss_pred CCCCCCCEEEEEECHHHHCHHHHHHHHHHHHCCCCCCEEEEEECC--HHHH-------------HHHHHHCCEEEECCC
T ss_conf 875788679997347762999999999986468978679987299--6664-------------368863142565889