HHsearch alignment for GI: 254781047 and conserved domain: PRK10365

>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=94.19  E-value=0.32  Score=27.81  Aligned_cols=123  Identities=16%  Similarity=0.122  Sum_probs=65.3

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH--HHH-HHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHCC
Q ss_conf             68864998888877289999999985781114688899--999-9999999997131122466-5578078999999613
Q gi|254781047|r   64 CSMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFY--EFM-KDVHSRIIMYRKKIEFGEI-LESDPIPLVASSIALE  139 (404)
Q Consensus        64 ~~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh--~FM-~~ih~~l~~~~~~~~~~~~-~~~dpl~~va~~l~~~  139 (404)
T Consensus       160 ~s~~pVLI~GE~GTGK~~~Ar~IH~~S~r~~~pfv~vnC~~l~~~l~eseLFG~~~gaftga~~~~~g~~------~~A~  233 (441)
T PRK10365        160 PSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRF------VEAD  233 (441)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCE------EECC
T ss_conf             8899489989998109999999996578778980798789898455589861775568789653468987------7889


Q ss_pred             CCEEEEEEEEECCCHHHHHHHHHHHHHHH-------------CCCEEEEECCCCHHHHHCCCCCHHHHH
Q ss_conf             87999842320471358889999999985-------------496899817868677523874056689
Q gi|254781047|r  140 SRVLCFDEFMITNIADAIILSRLFAALFS-------------HGCIIVMTSNFIPENLYKDEINRNVLV  195 (404)
Q Consensus       140 ~~lLCfDEF~V~DiaDAmil~rl~~~lf~-------------~gv~lV~TSN~~P~dLY~~GLqR~~Fl  195 (404)
T Consensus       234 gGTLfLdeI~~l~~~---~Q~kLl~~l~~~~~~~~g~~~~~~~d~RiIaat~~~l~~~v~~g~Fr~dLy  299 (441)
T PRK10365        234 GGTLFLDEIGDISPM---MQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLY  299 (441)
T ss_pred             CCEECCCCCCCCCHH---HHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCHHHHHHCCCCHHHHH
T ss_conf             982550231529999---999999877752100058873441363799837889999988198258999