HHsearch alignment for GI: 254781047 and conserved domain: PRK12422

>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=94.94  E-value=0.12  Score=30.56  Aligned_cols=80  Identities=20%  Similarity=0.241  Sum_probs=61.4

Q ss_pred             CCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             24689999985378899818987872463899989999999822898289980789788013467653134899898874
Q gi|254781047|r  287 LSANDFVEIANRFDVVIINDIPLLKEDRKDWIKRFIMLIDVFYEHKIGLIISSEENIEDLFPYKLRKGAFEIQRTVSRLY  366 (404)
Q Consensus       287 lg~~DYi~Ia~~f~ti~I~~VP~l~~~~~d~arRFI~LID~lYd~kv~Li~sa~~~~~~L~~~~~~~~~F~f~Rt~SRL~  366 (404)
T Consensus       191 ~~~~~Fr~~yr~~DvLLIDDIQfl~g-K~~tqeEff~tfN~L~~~~KQIVitsDr~P~el---~~l~-----~RL~SRf~  261 (455)
T PRK12422        191 GEMQRFRSFYRNVDALFIEDIEVFSG-KGATQEEFFHTFNSLHTEGKLIVISSSYAPGDL---KAME-----ERLISRFE  261 (455)
T ss_pred             CCHHHHHHHHHCCCEEEEEHHHHHHC-CHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH---HHHH-----HHHHHHHH
T ss_conf             88999999996388776314788728-488999999999999985996999689895765---1268-----99998863


Q ss_pred             -----HHCCHHHHH
Q ss_conf             -----524278897
Q gi|254781047|r  367 -----EMFSAQYIG  375 (404)
Q Consensus       367 -----EMqS~~yl~  375 (404)
T Consensus       262 ~GL~v~I~~Pd~et  275 (455)
T PRK12422        262 WGIAIPIHPLTREG  275 (455)
T ss_pred             CCEEECCCCCCHHH
T ss_conf             76132168999899