HHsearch alignment for GI: 254781047 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=94.94 E-value=0.12 Score=30.56 Aligned_cols=80 Identities=20% Similarity=0.241 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 24689999985378899818987872463899989999999822898289980789788013467653134899898874
Q gi|254781047|r 287 LSANDFVEIANRFDVVIINDIPLLKEDRKDWIKRFIMLIDVFYEHKIGLIISSEENIEDLFPYKLRKGAFEIQRTVSRLY 366 (404)
Q Consensus 287 lg~~DYi~Ia~~f~ti~I~~VP~l~~~~~d~arRFI~LID~lYd~kv~Li~sa~~~~~~L~~~~~~~~~F~f~Rt~SRL~ 366 (404)
T Consensus 191 ~~~~~Fr~~yr~~DvLLIDDIQfl~g-K~~tqeEff~tfN~L~~~~KQIVitsDr~P~el---~~l~-----~RL~SRf~ 261 (455)
T PRK12422 191 GEMQRFRSFYRNVDALFIEDIEVFSG-KGATQEEFFHTFNSLHTEGKLIVISSSYAPGDL---KAME-----ERLISRFE 261 (455)
T ss_pred CCHHHHHHHHHCCCEEEEEHHHHHHC-CHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH---HHHH-----HHHHHHHH
T ss_conf 88999999996388776314788728-488999999999999985996999689895765---1268-----99998863
Q ss_pred -----HHCCHHHHH
Q ss_conf -----524278897
Q gi|254781047|r 367 -----EMFSAQYIG 375 (404)
Q Consensus 367 -----EMqS~~yl~ 375 (404)
T Consensus 262 ~GL~v~I~~Pd~et 275 (455)
T PRK12422 262 WGIAIPIHPLTREG 275 (455)
T ss_pred CCEEECCCCCCHHH
T ss_conf 76132168999899