HHsearch alignment for GI: 254781047 and conserved domain: PRK13531

>PRK13531 regulatory ATPase RavA; Provisional.
Probab=94.29  E-value=0.013  Score=36.64  Aligned_cols=126  Identities=20%  Similarity=0.359  Sum_probs=69.1

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH--HHH------HHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             64998888877289999999985781114688899999999--999------9997131122466557807899999961
Q gi|254781047|r   67 QGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDV--HSR------IIMYRKKIEFGEILESDPIPLVASSIAL  138 (404)
Q Consensus        67 kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~i--h~~------l~~~~~~~~~~~~~~~dpl~~va~~l~~  138 (404)
T Consensus        40 ehvlllGPPGtAKS~larrl~~~~~~a~----~FeyLltRFstPeElFGP~si~~Lk~~---------g~y~R~t~G~LP  106 (498)
T PRK13531         40 ESVFLLGPPGIAKSLIARRLKFAFQHAR----AFEYLMTRFSTPEEVFGPLSIQALKDE---------GRYERLTSGYLP  106 (498)
T ss_pred             CCEEEECCCCHHHHHHHHHHHHHHCCCH----HHHHHHHCCCCHHHHCCCCCHHHHHHC---------CEEEEECCCCCC
T ss_conf             9469888995138899999999855740----899998746988885383329987117---------848972267588


Q ss_pred             CCCEEEEEEEEECCCHHHHHHHHHHHHH----HHCCC--------EEEEECCCCHHHHHCCCCCH--HHHHHHHHHHHHC
Q ss_conf             3879998423204713588899999999----85496--------89981786867752387405--6689899999850
Q gi|254781047|r  139 ESRVLCFDEFMITNIADAIILSRLFAAL----FSHGC--------IIVMTSNFIPENLYKDEINR--NVLVSFIELLEKK  204 (404)
Q Consensus       139 ~~~lLCfDEF~V~DiaDAmil~rl~~~l----f~~gv--------~lV~TSN~~P~dLY~~GLqR--~~FlPfI~~lk~~  204 (404)
T Consensus       107 ~A~iaFLDEIfKan---sAILNtLLtilNEr~f~nG~~~~~vPL~~li~ASNElP~~--~~~L~AlyDRfL-------~R  174 (498)
T PRK13531        107 EAEIVFLDEIWKAG---PAILNTLLTAINERRFRNGAHEEKIPMRLLVAASNELPEA--DSSLEALYDRML-------IR  174 (498)
T ss_pred             CCEEEHHHHHHHCC---HHHHHHHHHHHHHHEECCCCCEECCCHHHHHHCCCCCCCC--CCCHHHHHHHHH-------HH
T ss_conf             66131578786148---8999999998646403479831304468864304679999--840788887644-------10


Q ss_pred             CEEEECCCCCHHH
Q ss_conf             5089804731122
Q gi|254781047|r  205 LEIISLDSGQDYR  217 (404)
Q Consensus       205 ~~V~~l~~~~DYR  217 (404)
T Consensus       175 ~~v~~v~~~~nF~  187 (498)
T PRK13531        175 LWLDKVQDKANFR  187 (498)
T ss_pred             EECCCCCCHHHHH
T ss_conf             2231316766799