HHsearch alignment for GI: 254781047 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=93.33 E-value=0.21 Score=28.99 Aligned_cols=30 Identities=17% Similarity=0.342 Sum_probs=23.9
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCH
Q ss_conf 886499888887728999999998578111
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEK 94 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~ 94 (404)
T Consensus 42 ~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~ 71 (383)
T TIGR02928 42 RPSNIFIYGKTGTGKTAVTKYVMKELEEAA 71 (383)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 987258878889878899999999999986