HHsearch alignment for GI: 254781047 and conserved domain: cd00009

>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=98.63  E-value=3.2e-07  Score=65.88  Aligned_cols=108  Identities=15%  Similarity=0.056  Sum_probs=64.0

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE
Q ss_conf             886499888887728999999998578111--468889999999999999971311224665578078999999613879
Q gi|254781047|r   65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEK--KCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRV  142 (404)
Q Consensus        65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~--K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~l  142 (404)
T Consensus        18 ~~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~v   87 (151)
T cd00009          18 PPKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLVVAELFGHF----------LVRLLFELAEKAKPGV   87 (151)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHH----------HHHHHHHHHHHCCCCE
T ss_conf             998089989999886599999999712137982785477704677775760577----------8898999999769986


Q ss_pred             EEEEEEEECCCHHHHHHHHHHHHHHH-----CCCEEEEECCCCHH
Q ss_conf             99842320471358889999999985-----49689981786867
Q gi|254781047|r  143 LCFDEFMITNIADAIILSRLFAALFS-----HGCIIVMTSNFIPE  182 (404)
Q Consensus       143 LCfDEF~V~DiaDAmil~rl~~~lf~-----~gv~lV~TSN~~P~  182 (404)
T Consensus        88 l~iDEi~~l~~~~~~~~~~~l~~~~~~~~~~~~~~vI~~tn~~~~  132 (151)
T cd00009          88 LFIDEIDSLSRGAQNALLRVLETLNDLRIDRENVRVIGATNRPLL  132 (151)
T ss_pred             EEEECHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
T ss_conf             982016655999999999999871575406788899995289988