HHsearch alignment for GI: 254781047 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=92.15 E-value=0.98 Score=24.72 Aligned_cols=51 Identities=16% Similarity=0.157 Sum_probs=34.0
Q ss_pred HHHHHHHHHCCCCEEEEEEE-EECCCHHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 78999999613879998423-2047135888999999998549689981786
Q gi|254781047|r 129 IPLVASSIALESRVLCFDEF-MITNIADAIILSRLFAALFSHGCIIVMTSNF 179 (404)
Q Consensus 129 l~~va~~l~~~~~lLCfDEF-~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~ 179 (404)
T Consensus 141 rv~iAraL~~~P~illlDEPt~GLDp~~~~~i~~~i~~l~~~g~tili~tH~ 192 (232)
T cd03218 141 RVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHN 192 (232)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 9999999966999999889856889999999999999999589999999283