HHsearch alignment for GI: 254781047 and conserved domain: cd03227
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=95.73 E-value=0.013 Score=36.66 Aligned_cols=108 Identities=14% Similarity=0.146 Sum_probs=61.9
Q ss_pred CEEEEECCCCCCHHHHHHHHH-----HHCCC--CHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH--
Q ss_conf 649988888772899999999-----85781--114-68889999999999999971311224665578078999999--
Q gi|254781047|r 67 QGIYLHGDVGQGKSMLMNLFF-----ALVPI--EKK-CRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI-- 136 (404)
Q Consensus 67 kGlYL~G~VG~GKT~LMdlFy-----~~l~~--~~K-~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l-- 136 (404)
T Consensus 22 ~~~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~lSg----g~~~~~~l~~~l~~ 94 (162)
T cd03227 22 SLTIITGPNGSGKSTILDAIGLALGGAQSATRRRSGVKAGCIV---AAVSAELIFTRLQLSG----GEKELSALALILAL 94 (162)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC---HHHEEEEEECCCCCCC----CHHHHHHHHHHHHH
T ss_conf 6899989987757999999999999863267752555427764---0230576641200054----29999999999985
Q ss_pred --HCCCCEEEEEEE-EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCH
Q ss_conf --613879998423-204713588899999999854968998178686
Q gi|254781047|r 137 --ALESRVLCFDEF-MITNIADAIILSRLFAALFSHGCIIVMTSNFIP 181 (404)
Q Consensus 137 --~~~~~lLCfDEF-~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P 181 (404)
T Consensus 95 ~~~~~~~lillDE~~~Gtd~~~~~~l~~~i~~~~~~~~~~i~tTH~~e 142 (162)
T cd03227 95 ASLKPRPLYILDEIDRGLDPRDGQALAEAILEHLVKGAQVIVITHLPE 142 (162)
T ss_pred CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf 424898489963655799988999999999999976998999797399