>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=95.22  E-value=0.24  Score=28.55  Aligned_cols=48  Identities=19%  Similarity=0.302  Sum_probs=34.8

Q ss_pred             HHHHHHHCCCCEEEEEEE-EECCCHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             999999613879998423-204713588899999999854968998178
Q gi|254781047|r  131 LVASSIALESRVLCFDEF-MITNIADAIILSRLFAALFSHGCIIVMTSN  178 (404)
Q Consensus       131 ~va~~l~~~~~lLCfDEF-~V~DiaDAmil~rl~~~lf~~gv~lV~TSN  178 (404)
T Consensus       149 aIAraL~~~P~iLlLDEPTs~LD~~~~~~v~~li~~L~~~G~Tvi~vtH  197 (255)
T cd03236         149 AIAAALARDADFYFFDEPSSYLDIKQRLNAARLIRELAEDDNYVLVVEH  197 (255)
T ss_pred             HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             9999736899999997987658999999999999999978999999907