HHsearch alignment for GI: 254781047 and conserved domain: cd03249
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=95.41 E-value=0.061 Score=32.37 Aligned_cols=26 Identities=27% Similarity=0.354 Sum_probs=21.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 86499888887728999999998578
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVP 91 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~ 91 (404)
T Consensus 29 G~~iaIvG~sGsGKSTLl~ll~gl~~ 54 (238)
T cd03249 29 GKTVALVGSSGCGKSTVVSLLERFYD 54 (238)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 99999999999989999999823861