HHsearch alignment for GI: 254781048 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=91.75 E-value=1.1 Score=24.51 Aligned_cols=67 Identities=19% Similarity=0.154 Sum_probs=42.0
Q ss_pred EEEEECC-CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEC--CC----HHHHCCCCEEEE
Q ss_conf 2899889-8136899999995799869999657881289883076205446887568526--97----488378978999
Q gi|254781048|r 5 KIALIGS-GMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGT--SD----YSDIAEADVCIV 77 (320)
Q Consensus 5 KV~IIGa-G~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~--~d----~~~l~~aDivVi 77 (320)
T Consensus 2 ~ILV~GATG~lGr~vVr~Ll~~G~-~Vr~lvRnp~ka~~----l~~------~Gve~v~gDl~dpesl~~Al~GvdaVi~ 70 (319)
T CHL00194 2 SLLVIGATGTLGRQIVRRALDEGY-QVKCLVRNLRKAAF----LKE------WGAELVYGDLSLPETIPPALEGITAIID 70 (319)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHH----HHH------CCCEEEEECCCCHHHHHHHHCCCCEEEE
T ss_conf 799989985899999999996889-08999578676323----421------5967999427887789999659967999
Q ss_pred ECCCC
Q ss_conf 55666
Q gi|254781048|r 78 TAGIP 82 (320)
Q Consensus 78 tag~~ 82 (320)
T Consensus 71 ~~~~~ 75 (319)
T CHL00194 71 ASTSR 75 (319)
T ss_pred ECCCC
T ss_conf 45667