HHsearch alignment for GI: 254781048 and conserved domain: COG0421
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism].
Probab=90.89 E-value=1.3 Score=23.97 Aligned_cols=105 Identities=15% Similarity=0.236 Sum_probs=59.8
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH--HHCCCCCCCCEEEECCCH---HHHC-CCCEEE
Q ss_conf 8728998898136899999995799869999657881289883076--205446887568526974---8837-897899
Q gi|254781048|r 3 SNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIA--ESSPVEGFGAQLCGTSDY---SDIA-EADVCI 76 (320)
Q Consensus 3 ~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~--~~~~~~~~~~~v~~~~d~---~~l~-~aDivV 76 (320)
T Consensus 77 pk~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~-dpRv~i~i~Dg~~~v~~~~~~fDvIi 154 (282)
T COG0421 77 PKRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGAD-DPRVEIIIDDGVEFLRDCEEKFDVII 154 (282)
T ss_pred CCEEEEECCCC-CHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCC-CCCEEEEECCHHHHHHHCCCCCCEEE
T ss_conf 77699988976-69999998368843379997088999999986667543357-97368996107999874887677899
Q ss_pred EECCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 955666676557--4678998899999999765412667408871
Q gi|254781048|r 77 VTAGIPRKPSMS--RDDLLADNLKAIEKVGAGIRKYAPNSFVICI 119 (320)
Q Consensus 77 itag~~~~~g~~--R~dll~~N~~i~~~i~~~i~~~~p~~i~ivv 119 (320)
T Consensus 155 ~D~tdp~gp~~~Lft~eF-------y~~~~~~L---~~~Gi~v~q 189 (282)
T COG0421 155 VDSTDPVGPAEALFTEEF-------YEGCRRAL---KEDGIFVAQ 189 (282)
T ss_pred ECCCCCCCCCCCCCCHHH-------HHHHHHHC---CCCCEEEEE
T ss_conf 858899884302377999-------99999862---889689994