HHsearch alignment for GI: 254781048 and conserved domain: COG1086
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=97.34 E-value=0.0034 Score=40.87 Aligned_cols=222 Identities=18% Similarity=0.211 Sum_probs=135.4
Q ss_pred CCCEEEEECC-CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCH----HHHCC--CCE
Q ss_conf 9872899889-8136899999995799869999657881289883076205446887568526974----88378--978
Q gi|254781048|r 2 KSNKIALIGS-GMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDY----SDIAE--ADV 74 (320)
Q Consensus 2 k~~KV~IIGa-G~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~----~~l~~--aDi 74 (320)
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCE
T ss_conf 79889996898736799999998549878999617637799999999862787516899635346899999986388866
Q ss_pred EEEECCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE----CCCCHHH--HHHHHHHCCCCHHH-HHHHC
Q ss_conf 9995566667655--74678998899999999765412667408871----4842078--99998844998656-11000
Q gi|254781048|r 75 CIVTAGIPRKPSM--SRDDLLADNLKAIEKVGAGIRKYAPNSFVICI----TNPLDAM--VWALQKFSGLPSHM-VVGMA 145 (320)
Q Consensus 75 vVitag~~~~~g~--~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivv----tNPvDv~--~~~~~~~sg~~~~r-ViG~G 145 (320)
T Consensus 329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~~~~~~ 408 (588)
T COG1086 329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRNVSGTG 408 (588)
T ss_pred EEEHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88755553686310188999987217389999999983977899970586668841766889999999999741048888
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCC-EEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH
Q ss_conf 52568999999999719873355-05675078852465102354477015543001587876799998455101588887
Q gi|254781048|r 146 GILDSARFRYFLAQEFGVSVESV-TALVLGSHGDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVG 224 (320)
Q Consensus 146 t~LDs~R~~~~ia~~l~v~~~~V-~~~ViGeHGds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~ 224 (320)
T Consensus 409 T~f-----------------~~VRFGNVlGSr-GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~--- 467 (588)
T COG1086 409 TRF-----------------CVVRFGNVLGSR-GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI--- 467 (588)
T ss_pred CEE-----------------EEEEECCEECCC-CCCHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHH---
T ss_conf 579-----------------999825454588-77778899999759984546867056788899999999998750---
Q ss_pred HHCCCCCC----CCCHHHHHHHHHHH
Q ss_conf 51576543----22032323445545
Q gi|254781048|r 225 LLRSGSAY----YAPASSAIAIAESY 246 (320)
Q Consensus 225 ~~~kg~t~----~~~a~a~~~ii~aI 246 (320)
T Consensus 468 --~~gGeifvldMGepvkI~dLAk~m 491 (588)
T COG1086 468 --AKGGEIFVLDMGEPVKIIDLAKAM 491 (588)
T ss_pred --CCCCCEEEECCCCCEEHHHHHHHH
T ss_conf --689858998189972799999999