HHsearch alignment for GI: 254781048 and conserved domain: COG1091
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].
Probab=91.24 E-value=1 Score=24.73 Aligned_cols=204 Identities=23% Similarity=0.271 Sum_probs=98.1
Q ss_pred EEEEECC-CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCCC
Q ss_conf 2899889-813689999999579986999965788128988307620544688756852697488378978999556666
Q gi|254781048|r 5 KIALIGS-GMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIPR 83 (320)
Q Consensus 5 KV~IIGa-G~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~~ 83 (320)
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~-------~Ditd~~~v----~~~-----i~~-~~PDvVIn~AAyt~ 62 (281)
T COG1091 2 KILITGANGQLGTELRRALP--GEFEVIATDRAE-------LDITDPDAV----LEV-----IRE-TRPDVVINAAAYTA 62 (281)
T ss_pred CEEEECCCCHHHHHHHHHHC--CCCEEEECCCCC-------CCCCCHHHH----HHH-----HHH-HCCCEEEECCCCCC
T ss_conf 58997698767999999717--784399515765-------555685899----999-----986-19998998732036
Q ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH-------HHHCCCC-HHHHHHHCCCHHHHHH
Q ss_conf 7--6557467899889999999976541266740887148420789999-------8844998-6561100052568999
Q gi|254781048|r 84 K--PSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWAL-------QKFSGLP-SHMVVGMAGILDSARF 153 (320)
Q Consensus 84 ~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~-------~~~sg~~-~~rViG~Gt~LDs~R~ 153 (320)
T Consensus 63 vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiST-----DyVFDG~~~~~Y~E~D~~~P~nvYG~s-Kl----- 129 (281)
T COG1091 63 VDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHIST-----DYVFDGEKGGPYKETDTPNPLNVYGRS-KL----- 129 (281)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEC-----CEEECCCCCCCCCCCCCCCCHHHHHHH-HH-----
T ss_conf 541338989977767799999999999719--76999634-----457438989888778999970245477-89-----
Q ss_pred HHHHH-HHCCCCCCCC---EEEEECCCCCEEE-EECCCCCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHCCHHH--HHH
Q ss_conf 99999-9719873355---0567507885246-5102354477015543001--587876799998455101588--887
Q gi|254781048|r 154 RYFLA-QEFGVSVESV---TALVLGSHGDSMV-PMLRYATVSGIPVSDLVKL--GWTTQEKIDQIVKRTREGGAE--IVG 224 (320)
Q Consensus 154 ~~~ia-~~l~v~~~~V---~~~ViGeHGds~v-p~~S~~~v~g~p~~~~~~~--~~~~~~~~~~l~~~v~~~g~~--ii~ 224 (320)
T Consensus 130 ~GE~~v~~~~--~~~~I~Rtswv~g~~g~nFv~tml~la~-~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH 206 (281)
T COG1091 130 AGEEAVRAAG--PRHLILRTSWVYGEYGNNFVKTMLRLAK-EGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYH 206 (281)
T ss_pred HHHHHHHHHC--CCEEEEEEEEEECCCCCCHHHHHHHHHH-CCCCEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 7899999739--9879998565545888778999999850-599269979845387469999999999983455586799
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 5157654322032323445545288
Q gi|254781048|r 225 LLRSGSAYYAPASSAIAIAESYLKN 249 (320)
Q Consensus 225 ~~~kg~t~~~~a~a~~~ii~aIl~~ 249 (320)
T Consensus 207 ~~~~g~~------Swydfa~~I~~~ 225 (281)
T COG1091 207 LVNSGEC------SWYEFAKAIFEE 225 (281)
T ss_pred EECCCCC------CHHHHHHHHHHH
T ss_conf 8079741------199999999998