HHsearch alignment for GI: 254781048 and conserved domain: COG1206
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis].
Probab=94.14 E-value=0.34 Score=27.85 Aligned_cols=136 Identities=21% Similarity=0.287 Sum_probs=76.2
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCH-HHHHHH-HHH--HCCCCCCCCEEEECCC-HHHHCCCCEE
Q ss_conf 9987289988981368999999957998699996578812-898830-762--0544688756852697-4883789789
Q gi|254781048|r 1 MKSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMP-RGKALD-IAE--SSPVEGFGAQLCGTSD-YSDIAEADVC 75 (320)
Q Consensus 1 mk~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~-~g~~~D-l~~--~~~~~~~~~~v~~~~d-~~~l~~aDiv 75 (320)
T Consensus 1 ~~~~~i~VIGaGLAGSEAAwqiA~~Gv~-V~L~EMRp~k~TpaH~td~fAELVCSNSlr~~~~~navGlLk~EMR~lgSl 79 (439)
T COG1206 1 MMQQPINVIGAGLAGSEAAWQIAKRGVP-VILYEMRPVKGTPAHKTDNFAELVCSNSLRSDALTNAVGLLKAEMRLLGSL 79 (439)
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9877258975654451999999876983-799970456689754456524302125546403444457889999972117
Q ss_pred EEEC-CCCCCCC-----CCHHHHHHHHHHHHH------HHHHHHHHCCCCCCEEEECCCC--HHHHHHHHHHCCCC
Q ss_conf 9955-6666765-----574678998899999------9997654126674088714842--07899998844998
Q gi|254781048|r 76 IVTA-GIPRKPS-----MSRDDLLADNLKAIE------KVGAGIRKYAPNSFVICITNPL--DAMVWALQKFSGLP 137 (320)
Q Consensus 76 Vita-g~~~~~g-----~~R~dll~~N~~i~~------~i~~~i~~~~p~~i~ivvtNPv--Dv~~~~~~~~sg~~ 137 (320)
T Consensus 80 ii~~Ad~~~VPAGgALAVDR~~Fs~~vT~~l~~hpli~vireEvt~iP~dg~~vIATGPLTs~~La~~i~~ltG~d 155 (439)
T COG1206 80 IIEAADKHRVPAGGALAVDRDGFSQAVTEKLENHPLIEVIREEVTEIPPDGITVIATGPLTSDALAEKIKELTGED 155 (439)
T ss_pred HHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 8664154068887604661767789999998539977987110146899885799608989788999999860875