HHsearch alignment for GI: 254781048 and conserved domain: KOG1496
>KOG1496 consensus.
Probab=100.00 E-value=2.1e-42 Score=295.42 Aligned_cols=308 Identities=25% Similarity=0.373 Sum_probs=266.8
Q ss_pred CCEEEEECC-CCHHHHHHHHHHHCCC-C-----EEEEEECCC--CCHHHHHHHHHHHCCCCCCCCEEEECCC-HHHHCCC
Q ss_conf 872899889-8136899999995799-8-----699996578--8128988307620544688756852697-4883789
Q gi|254781048|r 3 SNKIALIGS-GMIGGTLAHLAVLKKL-G-----DVVLLDIVD--GMPRGKALDIAESSPVEGFGAQLCGTSD-YSDIAEA 72 (320)
Q Consensus 3 ~~KV~IIGa-G~VG~~~a~~~~~~~l-~-----ei~L~D~~~--~~~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~~a 72 (320)
T Consensus 4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a--~PlL~~Vvattd~~~afkdv 81 (332)
T KOG1496 4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCA--LPLLKGVVATTDEVEAFKDV 81 (332)
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHH--HHHHHHHHCCCCHHHHHCCC
T ss_conf 5478752455202678789872741656998648996078157788887887777523--16777654267766641567
Q ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHH
Q ss_conf 789995566667655746789988999999997654126-6740887148420789999884499865611000525689
Q gi|254781048|r 73 DVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYA-PNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSA 151 (320)
Q Consensus 73 DivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~ 151 (320)
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDhN 161 (332)
T KOG1496 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDHN 161 (332)
T ss_pred CEEEEECCCCCCCCCHHHHHHHHCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCCHHCCHHHHHHCHH
T ss_conf 67989636666566116668761112312326889975177844999547666304667640778842100023220101
Q ss_pred HHHHHHHHHCCCCCCCC-EEEEECCCCCEEEEECCCCCCCC----CHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999999719873355-05675078852465102354477----01554300158787679999845510158888751
Q gi|254781048|r 152 RFRYFLAQEFGVSVESV-TALVLGSHGDSMVPMLRYATVSG----IPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLL 226 (320)
Q Consensus 152 R~~~~ia~~l~v~~~~V-~~~ViGeHGds~vp~~S~~~v~g----~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~ 226 (320)
T Consensus 162 RA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~---g~Fi~tVQkRGaavi~a- 237 (332)
T KOG1496 162 RALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQ---GEFIETVQKRGAAVIKA- 237 (332)
T ss_pred HHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHC---CCHHHHHHHCCHHHHHH-
T ss_conf 68787887618852003215885365665477743225504677543788744411330---31356677512266655-
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCC--CCEEEEEEEEECCCCCC-CCEEEEEEEEECCCCCEEEEC-CCCCHHHHHHHHHHH
Q ss_conf 57654322032323445545288--97499999997364475-634788769997872288847-999889999999999
Q gi|254781048|r 227 RSGSAYYAPASSAIAIAESYLKN--KKNLLPCAAHLSGQYGV-EGFYVGVPVVIGHKGVEKIVE-LNLSFDEKDAFQKSV 302 (320)
Q Consensus 227 ~kg~t~~~~a~a~~~ii~aIl~~--~~~v~~~s~~~~g~yg~-~~v~~s~P~vig~~Gi~~i~~-l~Ls~~E~~~l~~sa 302 (320)
T Consensus 238 rk~SSA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km~~t~ 316 (332)
T KOG1496 238 RKLSSAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKMDLTA 316 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEE-CCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 411035667776766566413478986279976413887799988489730576-0884589737522077787665569
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999997655
Q gi|254781048|r 303 KATVDLCNSCTKLVP 317 (320)
Q Consensus 303 ~~i~~~~~~~~~l~~ 317 (320)
T Consensus 317 ~EL~eEkd~a~~~l~ 331 (332)
T KOG1496 317 KELKEEKDLAYSCLS 331 (332)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999887877887506