HHsearch alignment for GI: 254781048 and conserved domain: KOG1496

>KOG1496 consensus.
Probab=100.00  E-value=2.1e-42  Score=295.42  Aligned_cols=308  Identities=25%  Similarity=0.373  Sum_probs=266.8

Q ss_pred             CCEEEEECC-CCHHHHHHHHHHHCCC-C-----EEEEEECCC--CCHHHHHHHHHHHCCCCCCCCEEEECCC-HHHHCCC
Q ss_conf             872899889-8136899999995799-8-----699996578--8128988307620544688756852697-4883789
Q gi|254781048|r    3 SNKIALIGS-GMIGGTLAHLAVLKKL-G-----DVVLLDIVD--GMPRGKALDIAESSPVEGFGAQLCGTSD-YSDIAEA   72 (320)
Q Consensus         3 ~~KV~IIGa-G~VG~~~a~~~~~~~l-~-----ei~L~D~~~--~~~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~~a   72 (320)
T Consensus         4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a--~PlL~~Vvattd~~~afkdv   81 (332)
T KOG1496           4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCA--LPLLKGVVATTDEVEAFKDV   81 (332)
T ss_pred             CEEEEEECCCCHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHH--HHHHHHHHCCCCHHHHHCCC
T ss_conf             5478752455202678789872741656998648996078157788887887777523--16777654267766641567


Q ss_pred             CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHH
Q ss_conf             789995566667655746789988999999997654126-6740887148420789999884499865611000525689
Q gi|254781048|r   73 DVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYA-PNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSA  151 (320)
Q Consensus        73 DivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~  151 (320)
T Consensus        82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDhN  161 (332)
T KOG1496          82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDHN  161 (332)
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCCHHCCHHHHHHCHH
T ss_conf             67989636666566116668761112312326889975177844999547666304667640778842100023220101


Q ss_pred             HHHHHHHHHCCCCCCCC-EEEEECCCCCEEEEECCCCCCCC----CHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             99999999719873355-05675078852465102354477----01554300158787679999845510158888751
Q gi|254781048|r  152 RFRYFLAQEFGVSVESV-TALVLGSHGDSMVPMLRYATVSG----IPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLL  226 (320)
Q Consensus       152 R~~~~ia~~l~v~~~~V-~~~ViGeHGds~vp~~S~~~v~g----~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~  226 (320)
T Consensus       162 RA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~---g~Fi~tVQkRGaavi~a-  237 (332)
T KOG1496         162 RALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQ---GEFIETVQKRGAAVIKA-  237 (332)
T ss_pred             HHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHC---CCHHHHHHHCCHHHHHH-
T ss_conf             68787887618852003215885365665477743225504677543788744411330---31356677512266655-


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHCC--CCEEEEEEEEECCCCCC-CCEEEEEEEEECCCCCEEEEC-CCCCHHHHHHHHHHH
Q ss_conf             57654322032323445545288--97499999997364475-634788769997872288847-999889999999999
Q gi|254781048|r  227 RSGSAYYAPASSAIAIAESYLKN--KKNLLPCAAHLSGQYGV-EGFYVGVPVVIGHKGVEKIVE-LNLSFDEKDAFQKSV  302 (320)
Q Consensus       227 ~kg~t~~~~a~a~~~ii~aIl~~--~~~v~~~s~~~~g~yg~-~~v~~s~P~vig~~Gi~~i~~-l~Ls~~E~~~l~~sa  302 (320)
T Consensus       238 rk~SSA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km~~t~  316 (332)
T KOG1496         238 RKLSSAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKMDLTA  316 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEE-CCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             411035667776766566413478986279976413887799988489730576-0884589737522077787665569


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999997655
Q gi|254781048|r  303 KATVDLCNSCTKLVP  317 (320)
Q Consensus       303 ~~i~~~~~~~~~l~~  317 (320)
T Consensus       317 ~EL~eEkd~a~~~l~  331 (332)
T KOG1496         317 KELKEEKDLAYSCLS  331 (332)
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             999887877887506