HHsearch alignment for GI: 254781048 and conserved domain: PRK01710

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.62  E-value=0.062  Score=32.66  Aligned_cols=126  Identities=19%  Similarity=0.255  Sum_probs=70.4

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCC-HHHHHHHHHHHCCCCCCCCEEEECCC-HHHHCCCCEEEEE
Q ss_conf             998728998898136899999995799869999657881-28988307620544688756852697-4883789789995
Q gi|254781048|r    1 MKSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGM-PRGKALDIAESSPVEGFGAQLCGTSD-YSDIAEADVCIVT   78 (320)
Q Consensus         1 mk~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~-~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~~aDivVit   78 (320)
T Consensus        12 l~~kkv~i~GlG~sG~a~a~~L~~~g-~~v~~~D~~~~~~~~~~~~~l~~------~gi~~~~g~~~~~~~~~~d~vv~S   84 (458)
T PRK01710         12 IKNKKVAVVGIGVSNIPLIKFLVKLG-AKVTAFDKKSEEELGEISLELKE------KGVNLELGENYLDKLTGFDVIFKT   84 (458)
T ss_pred             HCCCEEEEEEECHHHHHHHHHHHHCC-CEEEEEECCCCHHHHHHHHHHHH------CCCEEEECCCHHHHCCCCCEEEEC
T ss_conf             78996999978788999999999788-97999989884314899999985------799899578405423788889989


Q ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE--CCCCHH---HHHHHHHHCCCC
Q ss_conf             566667-65574678998899999999765412667408871--484207---899998844998
Q gi|254781048|r   79 AGIPRK-PSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICI--TNPLDA---MVWALQKFSGLP  137 (320)
Q Consensus        79 ag~~~~-~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivv--tNPvDv---~~~~~~~~sg~~  137 (320)
T Consensus        85 PgI~~~~p~--~~~a~~~gi~v~~e~e-l~~~~~~~~-~IaVTGTnGKTTTtsmi~~iL~~~g~~  145 (458)
T PRK01710         85 PSMRIDSPE--LVKAKEEGAYITSEME-EFIKYCPAK-VFGITGSDGKTTTTTLIYEMLKEEGYK  145 (458)
T ss_pred             CCCCCCCHH--HHHHHHCCCCEECHHH-HHHHHCCCC-EEEEECCCCCHHHHHHHHHHHHHCCCC
T ss_conf             987998999--9999987993740999-998637587-799936898478999999999984997