HHsearch alignment for GI: 254781048 and conserved domain: PRK02705
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.53 E-value=0.7 Score=25.80 Aligned_cols=127 Identities=18% Similarity=0.177 Sum_probs=64.1
Q ss_pred EEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCH-HHHHHHHHHH--CCCCCCCCEEEECCCHHHHCCCCEEEEECCCCC
Q ss_conf 9988981368999999957998699996578812-8988307620--544688756852697488378978999556666
Q gi|254781048|r 7 ALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMP-RGKALDIAES--SPVEGFGAQLCGTSDYSDIAEADVCIVTAGIPR 83 (320)
Q Consensus 7 ~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~-~g~~~Dl~~~--~~~~~~~~~v~~~~d~~~l~~aDivVitag~~~ 83 (320)
T Consensus 4 ~V~GlG~sG~s~a~~L~~~G-~~v~~~D~~~~~~~~~~~~~L~~~gi~~~~g~~~~--~~~~~~~~~~~d~vV~SPGI~~ 80 (459)
T PRK02705 4 HVIGLGRSGIAAARLLKAQG-WEVVVSERNDSPELLERQQELEQEGITVELGKPLE--LESFQPWLDQPDLVVVSPGIPW 80 (459)
T ss_pred EEEEECHHHHHHHHHHHHCC-CEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCC--CCCHHHHCCCCCEEEECCCCCC
T ss_conf 99954899999999999789-95999989899234789999987598698167666--4301331167888998996499
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE--CCCCHH---HHHHHHHHCCCCH
Q ss_conf 765574678998899999999765412667408871--484207---8999988449986
Q gi|254781048|r 84 KPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICI--TNPLDA---MVWALQKFSGLPS 138 (320)
Q Consensus 84 ~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivv--tNPvDv---~~~~~~~~sg~~~ 138 (320)
T Consensus 81 ~~p~-~~~a~~~gi~i~~eiel~~-~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 138 (459)
T PRK02705 81 DHPT-LVELREKGIEVIGEMELAW-RALKHIPWVGITGTNGKTTVTHLLAHILQAAGLNA 138 (459)
T ss_pred CCHH-HHHHHHCCCCEECHHHHHH-HHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 8999-9999987997214999999-98504975777178972789999999999839985