HHsearch alignment for GI: 254781048 and conserved domain: PRK08339

Probab=90.52  E-value=1.5  Score=23.75  Aligned_cols=112  Identities=20%  Similarity=0.216  Sum_probs=62.9

Q ss_pred             CEEEEE-CC-CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEE--ECCCH----------HHH
Q ss_conf             728998-89-81368999999957998699996578812898830762054468875685--26974----------883
Q gi|254781048|r    4 NKIALI-GS-GMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLC--GTSDY----------SDI   69 (320)
Q Consensus         4 ~KV~II-Ga-G~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~--~~~d~----------~~l   69 (320)
T Consensus         8 gK~alITG~s~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGA-DVIILSRNEENLKRAKEKIKSES---DVEVHYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             99899916260999999999998699-99999798899999999998504---985799984899999999999999956


Q ss_pred             CCCCEEEEECCCCCCCC---CCHHH---HHHHHH----HHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf             78978999556666765---57467---899889----99999997654126674088714
Q gi|254781048|r   70 AEADVCIVTAGIPRKPS---MSRDD---LLADNL----KAIEKVGAGIRKYAPNSFVICIT  120 (320)
Q Consensus        70 ~~aDivVitag~~~~~g---~~R~d---ll~~N~----~i~~~i~~~i~~~~p~~i~ivvt  120 (320)
T Consensus        84 g~~dilv~nag~~~~~~~~~~~~e~w~~~~~vnl~~~~~~~~~~~p~m~~~~~-G~II~is  143 (263)
T PRK08339         84 GDPDIFFFSTGGPKPGYFMEMSMEDWEEAVKLLLYPAVYLTRALVPGMERKGF-GRIIYST  143 (263)
T ss_pred             CCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEC
T ss_conf             99989998999999989155999999999999869999999999876524389-6399955