HHsearch alignment for GI: 254781048 and conserved domain: PRK12724

>PRK12724 flagellar biosynthesis regulator FlhF; Provisional.
Probab=91.77  E-value=1.1  Score=24.53  Aligned_cols=129  Identities=13%  Similarity=0.149  Sum_probs=58.5

Q ss_pred             EEEEECCCCHHH--HHHHHHHHCCC---CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHH------CCCC
Q ss_conf             289988981368--99999995799---869999657881289883076205446887568526974883------7897
Q gi|254781048|r    5 KIALIGSGMIGG--TLAHLAVLKKL---GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDI------AEAD   73 (320)
Q Consensus         5 KV~IIGaG~VG~--~~a~~~~~~~l---~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l------~~aD   73 (320)
T Consensus       225 vi~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIgAvE-QLktYa~Il~iPv~vv~--~~~el~~al~~~~~D  301 (432)
T PRK12724        225 VVFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIE-QLKRYADTMGMPFYPVK--DIKKFKETLARDGSE  301 (432)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHHHHHHHCCCEEEEE--CHHHHHHHHHHCCCC
T ss_conf             999989999888999999999999974992799952665377999-99999998599459951--899999999856999


Q ss_pred             EEEE-ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE--CCCCHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             8999-556666765574678998899999999765412667408871--4842078999988449986561100
Q gi|254781048|r   74 VCIV-TAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICI--TNPLDAMVWALQKFSGLPSHMVVGM  144 (320)
Q Consensus        74 ivVi-tag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivv--tNPvDv~~~~~~~~sg~~~~rViG~  144 (320)
T Consensus       302 lILIDTAGrS~rd~~--------~~~eL~~ll~~~~~~~~ie~~LVLSaTtk~~dl~~ii~~f~~l~~~~lIfT  367 (432)
T PRK12724        302 LILIDTAGYSHRNLE--------QLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNYRRILLT  367 (432)
T ss_pred             EEEEECCCCCCCCHH--------HHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             999929998978999--------999999999863667885179999788998999999998426999849997