HHsearch alignment for GI: 254781048 and conserved domain: PRK12810
>PRK12810 gltD glutamate synthase subunit beta; Reviewed.
Probab=94.23 E-value=0.42 Score=27.24 Aligned_cols=79 Identities=20% Similarity=0.176 Sum_probs=44.0
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC------------CCHHHHHHH--HHHHCC---CCCCCCEEEECCC
Q ss_conf 87289988981368999999957998699996578------------812898830--762054---4688756852697
Q gi|254781048|r 3 SNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVD------------GMPRGKALD--IAESSP---VEGFGAQLCGTSD 65 (320)
Q Consensus 3 ~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~------------~~~~g~~~D--l~~~~~---~~~~~~~v~~~~d 65 (320)
T Consensus 143 gkkVAVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GGll~yGIP~~RLpk~v~~~ei~~l~~~GV~~~~n~~VG~dit 221 (472)
T PRK12810 143 GKKVAVVGSGPAGLAAADQLARAGH-KVTVFERDDRIGGLLRYGIPDFKLEKDVIDRRIELMEGEGIEFRTGVEVGKDIT 221 (472)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECEECCCCCC
T ss_conf 9989998977899999999986697-589972577777546531788555358999999999857978990523187576
Q ss_pred HHHH-CCCCEEEEECCCC
Q ss_conf 4883-7897899955666
Q gi|254781048|r 66 YSDI-AEADVCIVTAGIP 82 (320)
Q Consensus 66 ~~~l-~~aDivVitag~~ 82 (320)
T Consensus 222 ~~~L~~~yDAV~la~Ga~ 239 (472)
T PRK12810 222 AEQLLAEYDAVFLGGGAY 239 (472)
T ss_pred HHHHHCCCCEEEEECCCC
T ss_conf 999850579899903778