HHsearch alignment for GI: 254781048 and conserved domain: PRK12814
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional.
Probab=93.26 E-value=0.6 Score=26.23 Aligned_cols=80 Identities=23% Similarity=0.252 Sum_probs=46.6
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCC-----------EEEEEECCCCCHHHHHHH--HHHHCCCCC--CCCEEEECC--C
Q ss_conf 87289988981368999999957998-----------699996578812898830--762054468--875685269--7
Q gi|254781048|r 3 SNKIALIGSGMIGGTLAHLAVLKKLG-----------DVVLLDIVDGMPRGKALD--IAESSPVEG--FGAQLCGTS--D 65 (320)
Q Consensus 3 ~~KV~IIGaG~VG~~~a~~~~~~~l~-----------ei~L~D~~~~~~~g~~~D--l~~~~~~~~--~~~~v~~~~--d 65 (320)
T Consensus 193 GKkVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~~~GGmlryGIP~yRLPk~vld~EI~~i~-~~GV~~~~n~~vG~dit 271 (652)
T PRK12814 193 GKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLR-AMGAEFRFNTVFGRDIT 271 (652)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHH-HCCCEEEEEEEECCCCC
T ss_conf 99799968378999999999977990699815888898676448633389999999999999-71985886679477477
Q ss_pred HHHH-CCCCEEEEECCCCC
Q ss_conf 4883-78978999556666
Q gi|254781048|r 66 YSDI-AEADVCIVTAGIPR 83 (320)
Q Consensus 66 ~~~l-~~aDivVitag~~~ 83 (320)
T Consensus 272 l~~L~~~yDAVflaiGa~~ 290 (652)
T PRK12814 272 LEELQKEFDAVLLAVGAQK 290 (652)
T ss_pred HHHHHHHCCEEEEEECCCC
T ss_conf 9999865899999755787