HHsearch alignment for GI: 254781048 and conserved domain: PRK12814

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional.
Probab=93.26  E-value=0.6  Score=26.23  Aligned_cols=80  Identities=23%  Similarity=0.252  Sum_probs=46.6

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHCCCC-----------EEEEEECCCCCHHHHHHH--HHHHCCCCC--CCCEEEECC--C
Q ss_conf             87289988981368999999957998-----------699996578812898830--762054468--875685269--7
Q gi|254781048|r    3 SNKIALIGSGMIGGTLAHLAVLKKLG-----------DVVLLDIVDGMPRGKALD--IAESSPVEG--FGAQLCGTS--D   65 (320)
Q Consensus         3 ~~KV~IIGaG~VG~~~a~~~~~~~l~-----------ei~L~D~~~~~~~g~~~D--l~~~~~~~~--~~~~v~~~~--d   65 (320)
T Consensus       193 GKkVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~~~GGmlryGIP~yRLPk~vld~EI~~i~-~~GV~~~~n~~vG~dit  271 (652)
T PRK12814        193 GKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLR-AMGAEFRFNTVFGRDIT  271 (652)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHH-HCCCEEEEEEEECCCCC
T ss_conf             99799968378999999999977990699815888898676448633389999999999999-71985886679477477


Q ss_pred             HHHH-CCCCEEEEECCCCC
Q ss_conf             4883-78978999556666
Q gi|254781048|r   66 YSDI-AEADVCIVTAGIPR   83 (320)
Q Consensus        66 ~~~l-~~aDivVitag~~~   83 (320)
T Consensus       272 l~~L~~~yDAVflaiGa~~  290 (652)
T PRK12814        272 LEELQKEFDAVLLAVGAQK  290 (652)
T ss_pred             HHHHHHHCCEEEEEECCCC
T ss_conf             9999865899999755787