HHsearch alignment for GI: 254781048 and conserved domain: PRK12861

Probab=95.41  E-value=0.023  Score=35.42  Aligned_cols=110  Identities=17%  Similarity=0.208  Sum_probs=61.9

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHCCC--CEEEEEECCCCCHHHHHHHH-HHHCCCCCCCCEEEECCC-HHHHCCCCEEEE
Q ss_conf             98728998898136899999995799--86999965788128988307-620544688756852697-488378978999
Q gi|254781048|r    2 KSNKIALIGSGMIGGTLAHLAVLKKL--GDVVLLDIVDGMPRGKALDI-AESSPVEGFGAQLCGTSD-YSDIAEADVCIV   77 (320)
Q Consensus         2 k~~KV~IIGaG~VG~~~a~~~~~~~l--~ei~L~D~~~~~~~g~~~Dl-~~~~~~~~~~~~v~~~~d-~~~l~~aDivVi   77 (320)
T Consensus       186 ~~~kiv~~GaGaa~ia~~~l~~~~G~~~~ni~~~D~~G~i~~~r~-~~~~~~k~~~a~~t~---~~~l~ea~~gaDvfi-  260 (762)
T PRK12861        186 KEVKVVTSGAGAAALACLDLLVDLGLPVENIWVTDIEGVVYRGRT-TLMDPAKERFAQETD---ARTLAEVIGGADVFL-  260 (762)
T ss_pred             HHEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHCCC---CCCHHHHHCCCCEEE-
T ss_conf             561699968778899999999983999555899947785118986-535799999985689---777999837898899-


Q ss_pred             ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCH-HHHHHHHHH
Q ss_conf             55666676557467899889999999976541266740887148420-789999884
Q gi|254781048|r   78 TAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLD-AMVWALQKF  133 (320)
Q Consensus        78 tag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvD-v~~~~~~~~  133 (320)
T Consensus       261 --G~S-~~~~~~~--------------~mv~~Ma~~pivfalANP~PEI~p~~a~~~  300 (762)
T PRK12861        261 --GLS-AGGVLKA--------------EMLKAMAARPLILALANPTPEIFPELAHAT  300 (762)
T ss_pred             --ECC-CCCCCCH--------------HHHHHHCCCCEEEECCCCCCCCCHHHHHHH
T ss_conf             --767-8998999--------------999853778769972699988898998541