HHsearch alignment for GI: 254781048 and conserved domain: TIGR02632

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=95.30  E-value=0.13  Score=30.53  Aligned_cols=225  Identities=21%  Similarity=0.295  Sum_probs=116.3

Q ss_pred             CEEEEE-C-CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH--HC-------------CCCCCCCEEEECCC-
Q ss_conf             728998-8-981368999999957998699996578812898830762--05-------------44688756852697-
Q gi|254781048|r    4 NKIALI-G-SGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAE--SS-------------PVEGFGAQLCGTSD-   65 (320)
Q Consensus         4 ~KV~II-G-aG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~--~~-------------~~~~~~~~v~~~~d-   65 (320)
T Consensus       424 ~~Va~VtGGasGIG~~~A~rL~~eGA-hvV~aD~d~~~a~~va~~~~~~fG~d~a~AGsdisaCGPaiGl~~DvT~e~~v  502 (709)
T TIGR02632       424 RRVAFVTGGASGIGRETARRLVDEGA-HVVLADLDAEAAEAVAAEIVDKFGADKAVAGSDISACGPAIGLKLDVTDEEAV  502 (709)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHCCC-EEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCHHCCCCCEEEEEEECCHHHH
T ss_conf             70688973886526899999973697-79996236578999999986313888121143200046710027631758999


Q ss_pred             ---HHH----HCCCCEEEEECCCCCC-CCC--CHHHHHHHHHHHH--------HHHHHHHHHCC-CCCCEEEEC-CCC--
Q ss_conf             ---488----3789789995566667-655--7467899889999--------99997654126-674088714-842--
Q gi|254781048|r   66 ---YSD----IAEADVCIVTAGIPRK-PSM--SRDDLLADNLKAI--------EKVGAGIRKYA-PNSFVICIT-NPL--  123 (320)
Q Consensus        66 ---~~~----l~~aDivVitag~~~~-~g~--~R~dll~~N~~i~--------~~i~~~i~~~~-p~~i~ivvt-NPv--  123 (320)
T Consensus       503 ~~~f~~v~~~yGGvD~vv~nAGi~~S~p~~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q~lGG~~VfiaSkNav~A  582 (709)
T TIGR02632       503 KAAFAEVALAYGGVDIVVNNAGIAVSSPLEETERLEEWDLNLDILATGYFLVAREAARLMRKQGLGGNIVFIASKNAVVA  582 (709)
T ss_pred             HHHHHHHHHHHCCEEEEEECCCHHCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEE
T ss_conf             99999999974984787652530105770232215543201201012003588899999973179855677611000111


Q ss_pred             --HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHC---CCCCCCCE-EEEECCCCCEEEEE-CC--CCCCCCCHH
Q ss_conf             --07899998844998656110005256899999999971---98733550-56750788524651-02--354477015
Q gi|254781048|r  124 --DAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEF---GVSVESVT-ALVLGSHGDSMVPM-LR--YATVSGIPV  194 (320)
Q Consensus       124 --Dv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l---~v~~~~V~-~~ViGeHGds~vp~-~S--~~~v~g~p~  194 (320)
T Consensus       583 ~kn~~AY~aaKA~---------------~~Hl~R~LA~Ela~~GiRVNtV~PdaVl~--GS~if~~~W~~~raA~ygi~f  645 (709)
T TIGR02632       583 GKNASAYSAAKAA---------------EAHLARCLAAELAELGIRVNTVNPDAVLR--GSGIFDGEWREERAAAYGIPF  645 (709)
T ss_pred             CCCCCHHHHHHHH---------------HHHHHHHHHHHCCCCCEEEECCCCCHHCC--CCCCCCHHHHHHHHHHHCCCC
T ss_conf             7884055589999---------------99899999981478864640106500110--552153367888887707743


Q ss_pred             HHHHHCCCCCHH-HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC-CCCEEEEE
Q ss_conf             543001587876-799998455101588887515765432203232344554528-89749999
Q gi|254781048|r  195 SDLVKLGWTTQE-KIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIAIAESYLK-NKKNLLPC  256 (320)
Q Consensus       195 ~~~~~~~~~~~~-~~~~l~~~v~~~g~~ii~~~~kg~t~~~~a~a~~~ii~aIl~-~~~~v~~~  256 (320)
T Consensus       646 tade-----Ptdvl~d~L~~fY~~Rsl-----Lk~~v~p~d~AeAvf~L~S~~~~~tTG~~i~V  699 (709)
T TIGR02632       646 TADE-----PTDVLADKLEEFYAKRSL-----LKREVLPADIAEAVFFLASDKLEKTTGLIITV  699 (709)
T ss_pred             CCCC-----CHHHHHHHHHHHHHHHHH-----CCCCCCCHHHHHHHHHHHCCCCCCCCCCEECC
T ss_conf             4687-----235788889889875432-----37766808899999997345101027866403