HHsearch alignment for GI: 254781048 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=95.30 E-value=0.13 Score=30.53 Aligned_cols=225 Identities=21% Similarity=0.295 Sum_probs=116.3
Q ss_pred CEEEEE-C-CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH--HC-------------CCCCCCCEEEECCC-
Q ss_conf 728998-8-981368999999957998699996578812898830762--05-------------44688756852697-
Q gi|254781048|r 4 NKIALI-G-SGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAE--SS-------------PVEGFGAQLCGTSD- 65 (320)
Q Consensus 4 ~KV~II-G-aG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~--~~-------------~~~~~~~~v~~~~d- 65 (320)
T Consensus 424 ~~Va~VtGGasGIG~~~A~rL~~eGA-hvV~aD~d~~~a~~va~~~~~~fG~d~a~AGsdisaCGPaiGl~~DvT~e~~v 502 (709)
T TIGR02632 424 RRVAFVTGGASGIGRETARRLVDEGA-HVVLADLDAEAAEAVAAEIVDKFGADKAVAGSDISACGPAIGLKLDVTDEEAV 502 (709)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCC-EEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCHHCCCCCEEEEEEECCHHHH
T ss_conf 70688973886526899999973697-79996236578999999986313888121143200046710027631758999
Q ss_pred ---HHH----HCCCCEEEEECCCCCC-CCC--CHHHHHHHHHHHH--------HHHHHHHHHCC-CCCCEEEEC-CCC--
Q ss_conf ---488----3789789995566667-655--7467899889999--------99997654126-674088714-842--
Q gi|254781048|r 66 ---YSD----IAEADVCIVTAGIPRK-PSM--SRDDLLADNLKAI--------EKVGAGIRKYA-PNSFVICIT-NPL-- 123 (320)
Q Consensus 66 ---~~~----l~~aDivVitag~~~~-~g~--~R~dll~~N~~i~--------~~i~~~i~~~~-p~~i~ivvt-NPv-- 123 (320)
T Consensus 503 ~~~f~~v~~~yGGvD~vv~nAGi~~S~p~~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q~lGG~~VfiaSkNav~A 582 (709)
T TIGR02632 503 KAAFAEVALAYGGVDIVVNNAGIAVSSPLEETERLEEWDLNLDILATGYFLVAREAARLMRKQGLGGNIVFIASKNAVVA 582 (709)
T ss_pred HHHHHHHHHHHCCEEEEEECCCHHCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEE
T ss_conf 99999999974984787652530105770232215543201201012003588899999973179855677611000111
Q ss_pred --HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHC---CCCCCCCE-EEEECCCCCEEEEE-CC--CCCCCCCHH
Q ss_conf --07899998844998656110005256899999999971---98733550-56750788524651-02--354477015
Q gi|254781048|r 124 --DAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEF---GVSVESVT-ALVLGSHGDSMVPM-LR--YATVSGIPV 194 (320)
Q Consensus 124 --Dv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l---~v~~~~V~-~~ViGeHGds~vp~-~S--~~~v~g~p~ 194 (320)
T Consensus 583 ~kn~~AY~aaKA~---------------~~Hl~R~LA~Ela~~GiRVNtV~PdaVl~--GS~if~~~W~~~raA~ygi~f 645 (709)
T TIGR02632 583 GKNASAYSAAKAA---------------EAHLARCLAAELAELGIRVNTVNPDAVLR--GSGIFDGEWREERAAAYGIPF 645 (709)
T ss_pred CCCCCHHHHHHHH---------------HHHHHHHHHHHCCCCCEEEECCCCCHHCC--CCCCCCHHHHHHHHHHHCCCC
T ss_conf 7884055589999---------------99899999981478864640106500110--552153367888887707743
Q ss_pred HHHHHCCCCCHH-HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC-CCCEEEEE
Q ss_conf 543001587876-799998455101588887515765432203232344554528-89749999
Q gi|254781048|r 195 SDLVKLGWTTQE-KIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIAIAESYLK-NKKNLLPC 256 (320)
Q Consensus 195 ~~~~~~~~~~~~-~~~~l~~~v~~~g~~ii~~~~kg~t~~~~a~a~~~ii~aIl~-~~~~v~~~ 256 (320)
T Consensus 646 tade-----Ptdvl~d~L~~fY~~Rsl-----Lk~~v~p~d~AeAvf~L~S~~~~~tTG~~i~V 699 (709)
T TIGR02632 646 TADE-----PTDVLADKLEEFYAKRSL-----LKREVLPADIAEAVFFLASDKLEKTTGLIITV 699 (709)
T ss_pred CCCC-----CHHHHHHHHHHHHHHHHH-----CCCCCCCHHHHHHHHHHHCCCCCCCCCCEECC
T ss_conf 4687-----235788889889875432-----37766808899999997345101027866403