HHsearch alignment for GI: 254781048 and conserved domain: TIGR02964
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC; InterPro: IPR014308 Members of this protein are the accessory protein XdhC, found in baceria, that is responsible for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products..
Probab=95.48 E-value=0.067 Score=32.43 Aligned_cols=122 Identities=19% Similarity=0.222 Sum_probs=73.1
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECC---CHHHHCCCCEEEEEC
Q ss_conf 87289988981368999999957998699996578812898830762054468875685269---748837897899955
Q gi|254781048|r 3 SNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTS---DYSDIAEADVCIVTA 79 (320)
Q Consensus 3 ~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~---d~~~l~~aDivVita 79 (320)
T Consensus 115 ~~~v~lFGAGHVG~ALv~~La~lP~~~~~WvD~Re~~F~--P~~~p~---~~~~gV~~~~~~H~P~Pe~----------- 178 (270)
T TIGR02964 115 APHVVLFGAGHVGRALVRALAPLPECRVTWVDSREEEFY--PEDIPL---ALIDGVAPLATDHSPEPEA----------- 178 (270)
T ss_pred CCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCHHHCC--CCCCCC---CCCCCCCEECCCCCCCHHH-----------
T ss_conf 581799867718889999861699579998637155548--743220---2547752301688888799-----------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE--CCCCH-HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf 6666765574678998899999999765412667408871--48420-78999988449986561100052568999999
Q gi|254781048|r 80 GIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICI--TNPLD-AMVWALQKFSGLPSHMVVGMAGILDSARFRYF 156 (320)
Q Consensus 80 g~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivv--tNPvD-v~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ 156 (320)
T Consensus 179 --------------------------~v~~aP~~s~~lvlTHdHaLD~~L~~~iL~R~DfAY~GlIGS~TK--r~rF~~R 230 (270)
T TIGR02964 179 --------------------------EVAEAPPGSYFLVLTHDHALDLELCEAILARGDFAYFGLIGSKTK--RARFEHR 230 (270)
T ss_pred --------------------------HHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECHHHHHH--HHHHHHH
T ss_conf --------------------------998379996599960585899999999962599068802010768--9999999
Q ss_pred HHHHCCCCCCCCE
Q ss_conf 9997198733550
Q gi|254781048|r 157 LAQEFGVSVESVT 169 (320)
Q Consensus 157 ia~~l~v~~~~V~ 169 (320)
T Consensus 231 L~~~-G~~~~~~~ 242 (270)
T TIGR02964 231 LRAR-GVDPAQIA 242 (270)
T ss_pred HHHC-CCCHHHHH
T ss_conf 9856-89878995