HHsearch alignment for GI: 254781048 and conserved domain: TIGR03589

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.35  E-value=0.0048  Score=39.86  Aligned_cols=223  Identities=14%  Similarity=0.157  Sum_probs=113.5

Q ss_pred             CCCCEEEEEC-CCCHHHHHHHHHHHC-CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEE--ECCCH----HHHCCC
Q ss_conf             9987289988-981368999999957-998699996578812898830762054468875685--26974----883789
Q gi|254781048|r    1 MKSNKIALIG-SGMIGGTLAHLAVLK-KLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLC--GTSDY----SDIAEA   72 (320)
Q Consensus         1 mk~~KV~IIG-aG~VG~~~a~~~~~~-~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~--~~~d~----~~l~~a   72 (320)
T Consensus         2 ~~~K~ILVTGGaGfIGS~lv~~Ll~~~~~~~iii~~~de~~~~~l~~~~~~------~~i~f~~gDIrD~~~l~~~~~~v   75 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA------PCLRFFIGDVRDKERLTRALRGV   75 (324)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCC------CCEEEEECCCCCHHHHHHHHCCC
T ss_conf             993999990797799999999999729982899966864032889851689------87599967777889999763488


Q ss_pred             CEEEEECCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC----CCCHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf             789995566667655--746789988999999997654126674088714----84207899998844998656110005
Q gi|254781048|r   73 DVCIVTAGIPRKPSM--SRDDLLADNLKAIEKVGAGIRKYAPNSFVICIT----NPLDAMVWALQKFSGLPSHMVVGMAG  146 (320)
Q Consensus        73 DivVitag~~~~~g~--~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvt----NPvDv~~~~~~~~sg~~~~rViG~Gt  146 (320)
T Consensus        76 D~VfHaAA~khVp~se~nP~e~i~tNV~Gt~nlleaa~~~~Vkk~V~iSTDka~~P~n~y--GasK~---~~E~l~~~--  148 (324)
T TIGR03589        76 DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLY--GATKL---ASDKLFVA--  148 (324)
T ss_pred             CEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CCCHH---HHHHHHHH--
T ss_conf             899994627767267769899999997999999999885554317862268888996743--12367---67999999--


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCC-EEEEECCCCCEEEEECCCCCCCCC-HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH
Q ss_conf             2568999999999719873355-056750788524651023544770-15543001587876799998455101588887
Q gi|254781048|r  147 ILDSARFRYFLAQEFGVSVESV-TALVLGSHGDSMVPMLRYATVSGI-PVSDLVKLGWTTQEKIDQIVKRTREGGAEIVG  224 (320)
Q Consensus       147 ~LDs~R~~~~ia~~l~v~~~~V-~~~ViGeHGds~vp~~S~~~v~g~-p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~  224 (320)
T Consensus       149 -------~~~~~~~~~~~~~~vRygNV~gsrg-SViP~F~~qi~~g~~~~~itd~~mtRf~mtv~dav~lV~~a~----~  216 (324)
T TIGR03589       149 -------ANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSL----E  216 (324)
T ss_pred             -------HHHHHCCCCCEEEEEEECCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHH----H
T ss_conf             -------9985078886378863327518886-639999999983999744499980799888999999999999----8


Q ss_pred             HHCCCCCCC---CCHHHHHHHHHHHHCC
Q ss_conf             515765432---2032323445545288
Q gi|254781048|r  225 LLRSGSAYY---APASSAIAIAESYLKN  249 (320)
Q Consensus       225 ~~~kg~t~~---~~a~a~~~ii~aIl~~  249 (320)
T Consensus       217 ~-~~~GEifv~k~~s~~i~dla~~~~~~  243 (324)
T TIGR03589       217 R-MLGGEIFVPKIPSMKITDLAEAMAPE  243 (324)
T ss_pred             H-CCCCEEEECCCCCCHHHHHHHHHHCC
T ss_conf             2-88984998369702599999986046