HHsearch alignment for GI: 254781048 and conserved domain: cd00300
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=0 Score=635.15 Aligned_cols=299 Identities=37% Similarity=0.649 Sum_probs=286.0
Q ss_pred EEEECCCCHHHHHHHHHHHCCC-CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCCCC
Q ss_conf 8998898136899999995799-869999657881289883076205446887568526974883789789995566667
Q gi|254781048|r 6 IALIGSGMIGGTLAHLAVLKKL-GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIPRK 84 (320)
Q Consensus 6 V~IIGaG~VG~~~a~~~~~~~l-~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~~~ 84 (320)
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~-~~~~~~~~~~~~~daDvvVitaG~~rk 79 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLAT-GTIVRGGDYADAADADIVVITAGAPRK 79 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC-CEEECCCCHHHHCCCCEEEECCCCCCC
T ss_conf 9898968899999999986799887999818998115688887725634688-539827988996799999987898999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 65574678998899999999765412667408871484207899998844998656110005256899999999971987
Q gi|254781048|r 85 PSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEFGVS 164 (320)
Q Consensus 85 ~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l~v~ 164 (320)
T Consensus 80 pg~tR~dll~~Na~I~k~i~~~i~~~~p~~ivivvtNPvDv~t~~~~k~sg~p~~rviG~gT~LDs~R~~~~la~~l~v~ 159 (300)
T cd00300 80 PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVAQKLSGLPKNRVIGSGTLLDSARFRSLLAEKLDVD 159 (300)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 79988999998889999999999841997189985796699999999961988442875365489999999998761989
Q ss_pred CCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 33550567507885246510235447701554300158787679999845510158888751576543220323234455
Q gi|254781048|r 165 VESVTALVLGSHGDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIAIAE 244 (320)
Q Consensus 165 ~~~V~~~ViGeHGds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~~kg~t~~~~a~a~~~ii~ 244 (320)
T Consensus 160 ~~~V~~~ViGeHGds~vp~~S~~~v~G~~~~~~~~~---~~~~~~~i~~~v~~~g~~Ii~--~KG~t~~~ia~a~~~i~~ 234 (300)
T cd00300 160 PQSVHAYVLGEHGDSQVVAWSTATVGGLPLEELAPF---TKLDLEAIEEEVRTSGYEIIR--LKGATNYGIATAIADIVK 234 (300)
T ss_pred CCCCCCEEEECCCCCEEEECCCCEECCEEHHHHCCC---CHHHHHHHHHHHHHCHHHHHH--CCCCCCHHHHHHHHHHHH
T ss_conf 000556255257883576220057998997996778---777899999999723254542--468776589999999999
Q ss_pred HHHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 452889749999999736447563478876999787228884799988999999999999999999
Q gi|254781048|r 245 SYLKNKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSVKATVDLCN 310 (320)
Q Consensus 245 aIl~~~~~v~~~s~~~~g~yg~~~v~~s~P~vig~~Gi~~i~~l~Ls~~E~~~l~~sa~~i~~~~~ 310 (320)
T Consensus 235 ail~d~~~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~l~L~~~E~~~l~~sa~~ik~~i~ 300 (300)
T cd00300 235 SILLDERRVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEIPLTEDEEAKLQKSAEALKEVLN 300 (300)
T ss_pred HHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 986046978999999647778877899999898548047981899999999999999999998609