HHsearch alignment for GI: 254781048 and conserved domain: cd00300

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00  E-value=0  Score=635.15  Aligned_cols=299  Identities=37%  Similarity=0.649  Sum_probs=286.0

Q ss_pred             EEEECCCCHHHHHHHHHHHCCC-CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCCCC
Q ss_conf             8998898136899999995799-869999657881289883076205446887568526974883789789995566667
Q gi|254781048|r    6 IALIGSGMIGGTLAHLAVLKKL-GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIPRK   84 (320)
Q Consensus         6 V~IIGaG~VG~~~a~~~~~~~l-~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~~~   84 (320)
T Consensus         1 V~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~-~~~~~~~~~~~~~daDvvVitaG~~rk   79 (300)
T cd00300           1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLAT-GTIVRGGDYADAADADIVVITAGAPRK   79 (300)
T ss_pred             CEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC-CEEECCCCHHHHCCCCEEEECCCCCCC
T ss_conf             9898968899999999986799887999818998115688887725634688-539827988996799999987898999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf             65574678998899999999765412667408871484207899998844998656110005256899999999971987
Q gi|254781048|r   85 PSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEFGVS  164 (320)
Q Consensus        85 ~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l~v~  164 (320)
T Consensus        80 pg~tR~dll~~Na~I~k~i~~~i~~~~p~~ivivvtNPvDv~t~~~~k~sg~p~~rviG~gT~LDs~R~~~~la~~l~v~  159 (300)
T cd00300          80 PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVAQKLSGLPKNRVIGSGTLLDSARFRSLLAEKLDVD  159 (300)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf             79988999998889999999999841997189985796699999999961988442875365489999999998761989


Q ss_pred             CCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             33550567507885246510235447701554300158787679999845510158888751576543220323234455
Q gi|254781048|r  165 VESVTALVLGSHGDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIAIAE  244 (320)
Q Consensus       165 ~~~V~~~ViGeHGds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~~kg~t~~~~a~a~~~ii~  244 (320)
T Consensus       160 ~~~V~~~ViGeHGds~vp~~S~~~v~G~~~~~~~~~---~~~~~~~i~~~v~~~g~~Ii~--~KG~t~~~ia~a~~~i~~  234 (300)
T cd00300         160 PQSVHAYVLGEHGDSQVVAWSTATVGGLPLEELAPF---TKLDLEAIEEEVRTSGYEIIR--LKGATNYGIATAIADIVK  234 (300)
T ss_pred             CCCCCCEEEECCCCCEEEECCCCEECCEEHHHHCCC---CHHHHHHHHHHHHHCHHHHHH--CCCCCCHHHHHHHHHHHH
T ss_conf             000556255257883576220057998997996778---777899999999723254542--468776589999999999


Q ss_pred             HHHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             452889749999999736447563478876999787228884799988999999999999999999
Q gi|254781048|r  245 SYLKNKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSVKATVDLCN  310 (320)
Q Consensus       245 aIl~~~~~v~~~s~~~~g~yg~~~v~~s~P~vig~~Gi~~i~~l~Ls~~E~~~l~~sa~~i~~~~~  310 (320)
T Consensus       235 ail~d~~~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~l~L~~~E~~~l~~sa~~ik~~i~  300 (300)
T cd00300         235 SILLDERRVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEIPLTEDEEAKLQKSAEALKEVLN  300 (300)
T ss_pred             HHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             986046978999999647778877899999898548047981899999999999999999998609