HHsearch alignment for GI: 254781048 and conserved domain: cd00757

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.96  E-value=0.0018  Score=42.70  Aligned_cols=128  Identities=23%  Similarity=0.407  Sum_probs=71.0

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECC
Q ss_conf             99872899889813689999999579986999965788128988307620544688756852697488378978999556
Q gi|254781048|r    1 MKSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAG   80 (320)
Q Consensus         1 mk~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag   80 (320)
T Consensus        19 L~~s~VlivG~GGlGs~~~~~La~~Gvg~i~lvD~D~v-------e~s------NLnRQ~l----~~~---~di-----G   73 (228)
T cd00757          19 LKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVV-------ELS------NLQRQIL----HTE---ADV-----G   73 (228)
T ss_pred             HHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC-------CCC------CCHHHHE----ECH---HHC-----C
T ss_conf             86497899887788999999999839975899978745-------567------6422102----378---668-----7


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH-HCCCCHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             6667655746789988999999997654126674088714842078999988-449986561100052568999999999
Q gi|254781048|r   81 IPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQK-FSGLPSHMVVGMAGILDSARFRYFLAQ  159 (320)
Q Consensus        81 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~-~sg~~~~rViG~Gt~LDs~R~~~~ia~  159 (320)
T Consensus        74 ~------~K~----------~~a~~~l~~iNp~i~i~~~~~~i~~~~--~~~~~~~~D--lVid---~~Dn~~~R~~ln~  130 (228)
T cd00757          74 Q------PKA----------EAAAERLRAINPDVEIEAYNERLDAEN--AEELIAGYD--LVLD---CTDNFATRYLIND  130 (228)
T ss_pred             C------CHH----------HHHHHHHHHHCCCCCCEEHHHCCCHHH--HHHHHHCCC--EEEE---CCCCHHHHHHHHH
T ss_conf             8------959----------999999985488753031321005756--998873798--9998---7799889999999


Q ss_pred             ---HCCCCCCCCEEEEECCCCC
Q ss_conf             ---7198733550567507885
Q gi|254781048|r  160 ---EFGVSVESVTALVLGSHGD  178 (320)
Q Consensus       160 ---~l~v~~~~V~~~ViGeHGd  178 (320)
T Consensus       131 ~~~~~~iP--~i~g~~~g~~Gq  150 (228)
T cd00757         131 ACVKLGKP--LVSGAVLGFEGQ  150 (228)
T ss_pred             HHHHCCCC--EEEEEECCCEEE
T ss_conf             99983998--899974002868