HHsearch alignment for GI: 254781048 and conserved domain: cd01337

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00  E-value=0  Score=543.14  Aligned_cols=295  Identities=28%  Similarity=0.459  Sum_probs=254.1

Q ss_pred             EEEEECC-CCHHHHHHHHHHHCCC-CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCH-HHHCCCCEEEEECCC
Q ss_conf             2899889-8136899999995799-869999657881289883076205446887568526974-883789789995566
Q gi|254781048|r    5 KIALIGS-GMIGGTLAHLAVLKKL-GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDY-SDIAEADVCIVTAGI   81 (320)
Q Consensus         5 KV~IIGa-G~VG~~~a~~~~~~~l-~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~-~~l~~aDivVitag~   81 (320)
T Consensus         2 KV~IIGA~G~VG~~~A~~l~~~~~~~elvLiDi~~--~~g~a~DL~h~~~~~~v~~-~~~~~~~~~~l~daDiVVitAG~   78 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVN--TPGVAADLSHINTPAKVTG-YLGPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCC--CHHHHHHHHCCCCCCCEEE-EECCCCHHHHHCCCCEEEECCCC
T ss_conf             89999999818999999997299977699982774--2667553216565685125-70887466774799999987898


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH----HHHCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf             6676557467899889999999976541266740887148420789999----884499865611000525689999999
Q gi|254781048|r   82 PRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWAL----QKFSGLPSHMVVGMAGILDSARFRYFL  157 (320)
Q Consensus        82 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~----~~~sg~~~~rViG~Gt~LDs~R~~~~i  157 (320)
T Consensus        79 ~rkpG~tR~dLl~~N~~I~k~i~~~i~~~~p~aiiivvtNPvD~lt~i~~~~~k~~~~~p~~rViG~-T~LDsaR~r~~l  157 (310)
T cd01337          79 PRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGV-TTLDVVRANTFV  157 (310)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEE-EEHHHHHHHHHH
T ss_conf             8997989899987407889999999982099849999708347799999999998179981207876-508889999999


Q ss_pred             HHHCCCCCCCCEEEEECCC-CCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH-CCCCCCCCC
Q ss_conf             9971987335505675078-85246510235447701554300158787679999845510158888751-576543220
Q gi|254781048|r  158 AQEFGVSVESVTALVLGSH-GDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLL-RSGSAYYAP  235 (320)
Q Consensus       158 a~~l~v~~~~V~~~ViGeH-Gds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~  235 (320)
T Consensus       158 a~~l~v~~~~V~a~ViGeH~g~s~vPl~s~~~~~~----------~~~~~~~~~i~~~v~~~g~eIi~~k~g~Gsa~~~~  227 (310)
T cd01337         158 AELLGLDPAKVNVPVIGGHSGVTILPLLSQCQPPF----------TFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSM  227 (310)
T ss_pred             HHHHCCCHHHCEEEEECCCCCCCEEEEECCCCCCC----------CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             99959787770667987569875787502686767----------78999999999999986899998504877230788


Q ss_pred             HHHHHHHHHHHHC---CCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3232344554528---8974999999973644756347887699978722888479-99889999999999999999999
Q gi|254781048|r  236 ASSAIAIAESYLK---NKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVEL-NLSFDEKDAFQKSVKATVDLCNS  311 (320)
Q Consensus       236 a~a~~~ii~aIl~---~~~~v~~~s~~~~g~yg~~~v~~s~P~vig~~Gi~~i~~l-~Ls~~E~~~l~~sa~~i~~~~~~  311 (320)
T Consensus       228 a~a~~~~v~~il~~i~~~~~v~~~~-~v~~~-~~~~~y~svP~~iG~~Gve~iielp~L~~~E~~~l~~S~~~lk~~I~k  305 (310)
T cd01337         228 AYAGARFANSLLRGLKGEKGVIECA-YVESD-VTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEK  305 (310)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEE-EEEEC-CCCCEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             8899999999999853998862658-99626-777479999899934816898268999999999999999999999997


Q ss_pred             HHHH
Q ss_conf             9976
Q gi|254781048|r  312 CTKL  315 (320)
Q Consensus       312 ~~~l  315 (320)
T Consensus       306 ~~~f  309 (310)
T cd01337         306 GVDF  309 (310)
T ss_pred             HHCC
T ss_conf             7412