HHsearch alignment for GI: 254781048 and conserved domain: cd01337
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=0 Score=543.14 Aligned_cols=295 Identities=28% Similarity=0.459 Sum_probs=254.1
Q ss_pred EEEEECC-CCHHHHHHHHHHHCCC-CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCH-HHHCCCCEEEEECCC
Q ss_conf 2899889-8136899999995799-869999657881289883076205446887568526974-883789789995566
Q gi|254781048|r 5 KIALIGS-GMIGGTLAHLAVLKKL-GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDY-SDIAEADVCIVTAGI 81 (320)
Q Consensus 5 KV~IIGa-G~VG~~~a~~~~~~~l-~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~-~~l~~aDivVitag~ 81 (320)
T Consensus 2 KV~IIGA~G~VG~~~A~~l~~~~~~~elvLiDi~~--~~g~a~DL~h~~~~~~v~~-~~~~~~~~~~l~daDiVVitAG~ 78 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVN--TPGVAADLSHINTPAKVTG-YLGPEELKKALKGADVVVIPAGV 78 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCC--CHHHHHHHHCCCCCCCEEE-EECCCCHHHHHCCCCEEEECCCC
T ss_conf 89999999818999999997299977699982774--2667553216565685125-70887466774799999987898
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH----HHHCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf 6676557467899889999999976541266740887148420789999----884499865611000525689999999
Q gi|254781048|r 82 PRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWAL----QKFSGLPSHMVVGMAGILDSARFRYFL 157 (320)
Q Consensus 82 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~----~~~sg~~~~rViG~Gt~LDs~R~~~~i 157 (320)
T Consensus 79 ~rkpG~tR~dLl~~N~~I~k~i~~~i~~~~p~aiiivvtNPvD~lt~i~~~~~k~~~~~p~~rViG~-T~LDsaR~r~~l 157 (310)
T cd01337 79 PRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGV-TTLDVVRANTFV 157 (310)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEE-EEHHHHHHHHHH
T ss_conf 8997989899987407889999999982099849999708347799999999998179981207876-508889999999
Q ss_pred HHHCCCCCCCCEEEEECCC-CCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH-CCCCCCCCC
Q ss_conf 9971987335505675078-85246510235447701554300158787679999845510158888751-576543220
Q gi|254781048|r 158 AQEFGVSVESVTALVLGSH-GDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLL-RSGSAYYAP 235 (320)
Q Consensus 158 a~~l~v~~~~V~~~ViGeH-Gds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~ 235 (320)
T Consensus 158 a~~l~v~~~~V~a~ViGeH~g~s~vPl~s~~~~~~----------~~~~~~~~~i~~~v~~~g~eIi~~k~g~Gsa~~~~ 227 (310)
T cd01337 158 AELLGLDPAKVNVPVIGGHSGVTILPLLSQCQPPF----------TFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSM 227 (310)
T ss_pred HHHHCCCHHHCEEEEECCCCCCCEEEEECCCCCCC----------CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99959787770667987569875787502686767----------78999999999999986899998504877230788
Q ss_pred HHHHHHHHHHHHC---CCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3232344554528---8974999999973644756347887699978722888479-99889999999999999999999
Q gi|254781048|r 236 ASSAIAIAESYLK---NKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVEL-NLSFDEKDAFQKSVKATVDLCNS 311 (320)
Q Consensus 236 a~a~~~ii~aIl~---~~~~v~~~s~~~~g~yg~~~v~~s~P~vig~~Gi~~i~~l-~Ls~~E~~~l~~sa~~i~~~~~~ 311 (320)
T Consensus 228 a~a~~~~v~~il~~i~~~~~v~~~~-~v~~~-~~~~~y~svP~~iG~~Gve~iielp~L~~~E~~~l~~S~~~lk~~I~k 305 (310)
T cd01337 228 AYAGARFANSLLRGLKGEKGVIECA-YVESD-VTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEK 305 (310)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEE-EEEEC-CCCCEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8899999999999853998862658-99626-777479999899934816898268999999999999999999999997
Q ss_pred HHHH
Q ss_conf 9976
Q gi|254781048|r 312 CTKL 315 (320)
Q Consensus 312 ~~~l 315 (320)
T Consensus 306 ~~~f 309 (310)
T cd01337 306 GVDF 309 (310)
T ss_pred HHCC
T ss_conf 7412