HHsearch alignment for GI: 254781048 and conserved domain: cd01339
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=0 Score=646.54 Aligned_cols=300 Identities=59% Similarity=1.019 Sum_probs=292.4
Q ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCCCCC
Q ss_conf 89988981368999999957998699996578812898830762054468875685269748837897899955666676
Q gi|254781048|r 6 IALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIPRKP 85 (320)
Q Consensus 6 V~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~~~~ 85 (320)
T Consensus 1 V~IIGaG~VG~~~a~~l~~~~~~el~L~D~~~~~a~g~a~DL~~~~~~~~~~~~v~~~~d~~~~~daDvvVitaG~~~k~ 80 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYEDIAGSDVVVITAGIPRKP 80 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCEEEEECCCCCCC
T ss_conf 98989688899999999857996799980999800579887761320158985899478879947998999906778998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 55746789988999999997654126674088714842078999988449986561100052568999999999719873
Q gi|254781048|r 86 SMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEFGVSV 165 (320)
Q Consensus 86 g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l~v~~ 165 (320)
T Consensus 81 g~tR~dLl~~N~~I~~~i~~~i~~~~p~~i~lvvsNPvDv~t~~~~k~sg~p~~rviG~gt~LDs~R~r~~la~~l~v~~ 160 (300)
T cd01339 81 GMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVAYKASGFPRNRVIGMAGVLDSARFRYFIAEELGVSV 160 (300)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 99889999988999999999999659984899827938999999999729884552333311788999999999959995
Q ss_pred CCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 35505675078852465102354477015543001587876799998455101588887515765432203232344554
Q gi|254781048|r 166 ESVTALVLGSHGDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIAIAES 245 (320)
Q Consensus 166 ~~V~~~ViGeHGds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~~kg~t~~~~a~a~~~ii~a 245 (320)
T Consensus 161 ~~V~~~ViGeHGds~vp~wS~~~v~G~~~~~~~-----~~~~~~~i~~~v~~~g~~ii~~kgkgst~~~ia~a~~~iv~a 235 (300)
T cd01339 161 KDVQAMVLGGHGDTMVPLPRYSTVGGIPLTELI-----TKEEIDEIVERTRNGGAEIVNLLKTGSAYYAPAAAIAEMVEA 235 (300)
T ss_pred HHCEEEEEECCCCCEEEEEEEEEECCCCHHHHC-----CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 460676665478856765677588883267867-----988899999999854999998625572666399999999999
Q ss_pred HHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 52889749999999736447563478876999787228884799988999999999999999999
Q gi|254781048|r 246 YLKNKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSVKATVDLCN 310 (320)
Q Consensus 246 Il~~~~~v~~~s~~~~g~yg~~~v~~s~P~vig~~Gi~~i~~l~Ls~~E~~~l~~sa~~i~~~~~ 310 (320)
T Consensus 236 Il~d~~~v~pvs~~~~g~yG~~~v~~s~P~~ig~~Gv~~i~~l~L~~~E~~~l~~sa~~ik~~ie 300 (300)
T cd01339 236 ILKDKKRVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIELDLTDEEKEAFDKSVESVKELID 300 (300)
T ss_pred HHCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 96478978999998447778604799989998588318985899999999999999999998629