HHsearch alignment for GI: 254781048 and conserved domain: cd01487
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.53 E-value=0.012 Score=37.32 Aligned_cols=135 Identities=21% Similarity=0.262 Sum_probs=78.1
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCCCC
Q ss_conf 28998898136899999995799869999657881289883076205446887568526974883789789995566667
Q gi|254781048|r 5 KIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIPRK 84 (320)
Q Consensus 5 KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~~~ 84 (320)
T Consensus 1 kV~IvG~GGLG~~~a~~La~aGvg~i~lvD~D~V---------e------~SNL~RQ---~~~~---~di-----G~~-- 52 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVV---------E------PSNLNRQ---QYFL---SQI-----GEP-- 52 (174)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCC---------C------CCCHHCC---HHHH---HHC-----CCH--
T ss_conf 9899876788999999999818973999989946---------6------6443013---2477---747-----974--
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCC-
Q ss_conf 6557467899889999999976541266740887148420789999884499865611000525689999999997198-
Q gi|254781048|r 85 PSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEFGV- 163 (320)
Q Consensus 85 ~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l~v- 163 (320)
T Consensus 53 ----K----------a~~a~~~l~~iNp~i~i~~~~~~l~~~n~~-~l~~~~D--~Vi---D~~Dn~~tr~~l~~~~~~~ 112 (174)
T cd01487 53 ----K----------VEALKENLREINPFVKIEAINIKIDENNLE-GLFGDCD--IVV---EAFDNAETKAMLAESLLGN 112 (174)
T ss_pred ----H----------HHHHHHHHHHHCCCCEEEEEECCCCHHHHH-HHHHCCC--EEE---ECCCCHHHHHHHHHHHHHH
T ss_conf ----9----------999999999879798899991444999999-9983799--999---9999989999999999998
Q ss_pred -CCCCCEEEEECCCCCEEEEECCCC
Q ss_conf -733550567507885246510235
Q gi|254781048|r 164 -SVESVTALVLGSHGDSMVPMLRYA 187 (320)
Q Consensus 164 -~~~~V~~~ViGeHGds~vp~~S~~ 187 (320)
T Consensus 113 ~~~plv~as~~~~~g~~~~~~~~~~ 137 (174)
T cd01487 113 KNKPVVCASGMAGFGDSNNIKTKKI 137 (174)
T ss_pred CCCCEEEEEEECCCCCCEEEECCCC
T ss_conf 7995999974510866057736999