HHsearch alignment for GI: 254781048 and conserved domain: cd04172

>cd04172 Rnd3_RhoE_Rho8 Rnd3/RhoE/Rho8 subfamily. Rnd3/RhoE/Rho8 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd2/Rho7. Rnd3/RhoE is known to bind the serine-threonine kinase ROCK I. Unphosphorylated Rnd3/RhoE associates primarily with membranes, but ROCK I-phosphorylated Rnd3/RhoE localizes in the cytosol. Phosphorylation of Rnd3/RhoE correlates with its activity in disrupting RhoA-induced stress fibers and inhibiting Ras-induced fibroblast transformation. In cells that lack stress fibers, such as macrophages and monocytes, Rnd3/RhoE induces a redistribution of actin, causing morphological changes in the cell. In addition, Rnd3/RhoE has been shown to inhibit cell cycle progression in G1 phase at a point upstream of the pRb family pocket protein checkpoint. Rnd3/RhoE has also been shown to inhibit Ras- and Raf-induced fibroblast transformation. In mammary epithelial tumor cells, Rnd3/RhoE regulates the assembly of the apical junction complex and tight
Probab=90.50  E-value=1.4  Score=23.81  Aligned_cols=107  Identities=19%  Similarity=0.277  Sum_probs=59.2

Q ss_pred             CEEEEECCCCHHHH-HHHHHHHCCCCE-----E---E--EEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCC
Q ss_conf             72899889813689-999999579986-----9---9--99657881289883076205446887568526974883789
Q gi|254781048|r    4 NKIALIGSGMIGGT-LAHLAVLKKLGD-----V---V--LLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEA   72 (320)
Q Consensus         4 ~KV~IIGaG~VG~~-~a~~~~~~~l~e-----i---~--L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~a   72 (320)
T Consensus         6 ~KivlvGd~~VGKTsLi~r~~~~~F~~~y~pTi~~~~~~~~~i~~~---~v~l~iwDTaGqe~f~-----~l~~~~y~~~   77 (182)
T cd04172           6 CKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQ---RIELSLWDTSGSPYYD-----NVRPLSYPDS   77 (182)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCE---EEEEEEEECCCCHHCC-----CCCHHHHCCC
T ss_conf             8999999999899999999983999998687353226899999999---9999999689862012-----2125551278


Q ss_pred             CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
Q ss_conf             7899955666676557467899889999999976541266740887148420789
Q gi|254781048|r   73 DVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMV  127 (320)
Q Consensus        73 DivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~  127 (320)
T Consensus        78 ~~~ilvydit~------~~Sf~~---v~~~W~~ei~~~~~~~~iiLVGnK~DLr~  123 (182)
T cd04172          78 DAVLICFDISR------PETLDS---VLKKWKGEIQEFCPNTKMLLVGCKSDLRT  123 (182)
T ss_pred             CEEEEEEECCC------HHHHHH---HHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf             78999964897------788999---99999999998687998899961710124