>cd04173 Rnd2_Rho7 Rnd2/Rho7 subfamily. Rnd2/Rho7 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd3/RhoE/Rho8. Rnd2/Rho7 is transiently expressed in radially migrating cells in the brain while they are within the subventricular zone of the hippocampus and cerebral cortex. These migrating cells typically develop into pyramidal neurons. Cells that exogenously expressed Rnd2/Rho7 failed to migrate to upper layers of the brain, suggesting that Rnd2/Rho7 plays a role in the radial migration and morphological changes of developing pyramidal neurons, and that Rnd2/Rho7 degradation is necessary for proper cellular migration. The Rnd2/Rho7 GEF Rapostlin is found primarily in the brain and together with Rnd2/Rho7 induces dendrite branching. Unlike Rnd1/Rho6 and Rnd3/RhoE/Rho8, which are RhoA antagonists, Rnd2/Rho7 binds the GEF Pragmin and significantly stimulates RhoA activity and Rho-A mediated cell contraction. Rnd2/Rho7 is also found to be expressed in sperma

Probab=91.22 E-value=1.3 Score=24.16 Aligned_cols=107 Identities=18% Similarity=0.275 Sum_probs=58.7 Q ss_pred CCEEEEECCCCHHHHH-HHHHHHCCCC-E---EEE------EECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCC Q ss_conf 8728998898136899-9999957998-6---999------965788128988307620544688756852697488378 Q gi|254781048|r 3 SNKIALIGSGMIGGTL-AHLAVLKKLG-D---VVL------LDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAE 71 (320) Q Consensus 3 ~~KV~IIGaG~VG~~~-a~~~~~~~l~-e---i~L------~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~ 71 (320) T Consensus 1 r~KiVlvGD~~VGKTsLl~~f~~~~F~~~y~pTi~~~~~~~~~vd~~~---v~L~iWDTAGqE~y~-----~lr~~yyr~ 72 (222) T cd04173 1 RCKIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRR---IELNMWDTSGSSYYD-----NVRPLAYPD 72 (222) T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCEE---EEEEEECCCCCCHHH-----HHHHHHCCC T ss_conf 909999898998989999999639999984784587789999999999---999997688850345-----567875036 Q ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH Q ss_conf 9789995566667655746789988999999997654126674088714842078 Q gi|254781048|r 72 ADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAM 126 (320) Q Consensus 72 aDivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~ 126 (320) T Consensus 73 a~~~llvfdit~~------~SF~-~v--~~~W~~ei~~~~p~~piiLVGnK~DLR 118 (222) T cd04173 73 SDAVLICFDISRP------ETLD-SV--LKKWQGETQEFCPNAKVVLVGCKLDMR 118 (222) T ss_pred CCEEEEEEECCCH------HHHH-HH--HHHHHHHHHHHCCCCCEEEEEECCCCC T ss_conf 9899999838977------8899-99--999999999858999789995874245

HHsearch alignment for GI: 254781048 and conserved domain: cd04173