HHsearch alignment for GI: 254781048 and conserved domain: cd05295
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.4e-45 Score=315.59 Aligned_cols=299 Identities=17% Similarity=0.210 Sum_probs=253.3
Q ss_pred CCCEEEEECC-CCHHHHHHHHHHHCCC---C---EEEEEECC--CCCHHHHHHHHHHHCCCCCCCCEEEECCCH-HHHCC
Q ss_conf 9872899889-8136899999995799---8---69999657--881289883076205446887568526974-88378
Q gi|254781048|r 2 KSNKIALIGS-GMIGGTLAHLAVLKKL---G---DVVLLDIV--DGMPRGKALDIAESSPVEGFGAQLCGTSDY-SDIAE 71 (320)
Q Consensus 2 k~~KV~IIGa-G~VG~~~a~~~~~~~l---~---ei~L~D~~--~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~-~~l~~ 71 (320)
T Consensus 122 ~Pl~V~VTgAag~iaYsLi~~lasGevFG~d~~i~L~LlDip~~~e~L~Gv~MELeDcA--fPlL~~v~~t~d~~~AF~d 199 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLA--FPLLRGISVTTDLDVAFKD 199 (452)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHC--CCCCCCEEEECCHHHHHCC
T ss_conf 87469994684476899999973767348987179995477407788636335676534--4001710676799998557
Q ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEEC-CCCHHHHHHHHHHCC-CCHHHHHHHCCCH
Q ss_conf 9789995566667655746789988999999997654126-674088714-842078999988449-9865611000525
Q gi|254781048|r 72 ADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYA-PNSFVICIT-NPLDAMVWALQKFSG-LPSHMVVGMAGIL 148 (320)
Q Consensus 72 aDivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~~i~ivvt-NPvDv~~~~~~~~sg-~~~~rViG~Gt~L 148 (320)
T Consensus 200 ad~ailvga~pr~~gmer~dlL~~n~~IF~~qG~aln~~Ak~~vKVLVvG~nPaNtNalI~~~~Ap~Ip~~Nf~Am-trL 278 (452)
T cd05295 200 AHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAV-ARL 278 (452)
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHEEEE-HHH
T ss_conf 9889995884788887188999987799999999998544568669996788651688999975899975763510-276
Q ss_pred HHHHHHHHHHHHCCCCCCCC-EEEEECCCCCEEEEECCCCCCCC------------CHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 68999999999719873355-05675078852465102354477------------015543001587876799998455
Q gi|254781048|r 149 DSARFRYFLAQEFGVSVESV-TALVLGSHGDSMVPMLRYATVSG------------IPVSDLVKLGWTTQEKIDQIVKRT 215 (320)
Q Consensus 149 Ds~R~~~~ia~~l~v~~~~V-~~~ViGeHGds~vp~~S~~~v~g------------~p~~~~~~~~~~~~~~~~~l~~~v 215 (320)
T Consensus 279 D~NRA~aqlA~Klgv~~~~VknviIWGNHS~TqyPD~~~A~V~~~~~ai~gp~~~~~~v~~~I~D~~Wl---~~eFi~~V 355 (452)
T cd05295 279 QENRAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWI---NGEFVATL 355 (452)
T ss_pred HHHHHHHHHHHHHCCCHHHCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHCCHHHH---HHHHHHHH
T ss_conf 666899999988399877732548985687882786653389364643346765566488884667778---74538999
Q ss_pred HCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC--CEEEEEEEEECCCCCC-CCEEEEEEEEECCCCCEEEEC-CCCC
Q ss_conf 10158888751576543220323234455452889--7499999997364475-634788769997872288847-9998
Q gi|254781048|r 216 REGGAEIVGLLRSGSAYYAPASSAIAIAESYLKNK--KNLLPCAAHLSGQYGV-EGFYVGVPVVIGHKGVEKIVE-LNLS 291 (320)
Q Consensus 216 ~~~g~~ii~~~~kg~t~~~~a~a~~~ii~aIl~~~--~~v~~~s~~~~g~yg~-~~v~~s~P~vig~~Gi~~i~~-l~Ls 291 (320)
T Consensus 356 q~Rg~a~-----~~ssa~SaA~A~~d~~rdW~~gT~~Ge~vSmgV~SdG~YGIpeGiifSfPv~~-~nG~w~IV~gL~i~ 429 (452)
T cd05295 356 KSLSSSL-----NHEAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKF-QNGSWEVVTDLELS 429 (452)
T ss_pred HHHHHHH-----HHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEE-ECCCEEEECCCCCC
T ss_conf 8615665-----43114419999999999986799989289998721898789998189853899-58918996897038
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899999999999999999999
Q gi|254781048|r 292 FDEKDAFQKSVKATVDLCNSC 312 (320)
Q Consensus 292 ~~E~~~l~~sa~~i~~~~~~~ 312 (320)
T Consensus 430 ef~r~ki~~t~~EL~~Er~~A 450 (452)
T cd05295 430 EILREVLKRITSDLIQEKLVA 450 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999989875