HHsearch alignment for GI: 254781048 and conserved domain: cd05298
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.85 E-value=3e-18 Score=138.60 Aligned_cols=301 Identities=18% Similarity=0.210 Sum_probs=185.2
Q ss_pred EEEEECCCCHHH-HHHH-HHHHC-CC--CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCH-HHHCCCCEEEEE
Q ss_conf 289988981368-9999-99957-99--869999657881289883076205446887568526974-883789789995
Q gi|254781048|r 5 KIALIGSGMIGG-TLAH-LAVLK-KL--GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDY-SDIAEADVCIVT 78 (320)
Q Consensus 5 KV~IIGaG~VG~-~~a~-~~~~~-~l--~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~-~~l~~aDivVit 78 (320)
T Consensus 2 KI~iIGaGS~~t~~li~~l~~~~~~l~~~ei~L~DId~~rL~~~~~la~~~~~~~g~~~~i~~ttdr~eAL~gADfVi~~ 81 (437)
T cd05298 2 KIVIAGGGSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKENYPEIKFVYTTDPEEAFTDADFVFAQ 81 (437)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEE
T ss_conf 69998984687799999998282006988899977999999999999999998529981799967999985799999996
Q ss_pred CCC------------CCCCCCCHHH--------HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCH
Q ss_conf 566------------6676557467--------89988999999997654126674088714842078999988449986
Q gi|254781048|r 79 AGI------------PRKPSMSRDD--------LLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPS 138 (320)
Q Consensus 79 ag~------------~~~~g~~R~d--------ll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~ 138 (320)
T Consensus 82 irvGg~~~r~~De~Ip~kyGivgqeT~G~GGi~~alRtiPv~ldia~di~e~cP~AwliNytNP~~~vt~al~~~--~~~ 159 (437)
T cd05298 82 IRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEALRRL--FPN 159 (437)
T ss_pred EEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH--CCC
T ss_conf 652683267888767987597760156646224011449999999999998799928997578789999999974--899
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECC-CCCEEEEECCCCCC-CCCHHHHH----HHCCCC---------
Q ss_conf 5611000525689999999997198733550567507-88524651023544-77015543----001587---------
Q gi|254781048|r 139 HMVVGMAGILDSARFRYFLAQEFGVSVESVTALVLGS-HGDSMVPMLRYATV-SGIPVSDL----VKLGWT--------- 203 (320)
Q Consensus 139 ~rViG~Gt~LDs~R~~~~ia~~l~v~~~~V~~~ViGe-HGds~vp~~S~~~v-~g~p~~~~----~~~~~~--------- 203 (320)
T Consensus 160 ~k~vGL-Ch-~~~~~~~~la~~Lg~~~~~v~~~~aGlNH----~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~~~~~~ 233 (437)
T cd05298 160 ARILNI-CD-MPIAIMDSMAAILGLDRKDLEPDYFGLNH----FGWFTKIYDKQGEDLLPKLREHVKENGYLPPDSDEEH 233 (437)
T ss_pred CCEEEE-CC-CHHHHHHHHHHHHCCCHHHEEEEEEECCH----HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHC
T ss_conf 988988-97-88999999999958988991788961042----9999785016885847999999973577766410101
Q ss_pred -----------------------CH----HH--HHHHHHHHH---CCHHHHH-----------H-HHCCCC---CCC-C-
Q ss_conf -----------------------87----67--999984551---0158888-----------7-515765---432-2-
Q gi|254781048|r 204 -----------------------TQ----EK--IDQIVKRTR---EGGAEIV-----------G-LLRSGS---AYY-A- 234 (320)
Q Consensus 204 -----------------------~~----~~--~~~l~~~v~---~~g~~ii-----------~-~~~kg~---t~~-~- 234 (320)
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~p~~y~~yy~~~~~~~~~~~~~~~r~~~~~~~~e~~~~e~~~~~~~~~~~~~~~~~~~ 313 (437)
T cd05298 234 RDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIETGTAEGSTFHVD 313 (437)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 57058899999999998556548771688873879999760866770999999899999999998763367542100365
Q ss_pred -CHHHHHHHHHHHHCCCCEEEEEEEEECCCC-CC-CCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf -032323445545288974999999973644-75-634788769997872288847999889999999999999999999
Q gi|254781048|r 235 -PASSAIAIAESYLKNKKNLLPCAAHLSGQY-GV-EGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSVKATVDLCNS 311 (320)
Q Consensus 235 -~a~a~~~ii~aIl~~~~~v~~~s~~~~g~y-g~-~~v~~s~P~vig~~Gi~~i~~l~Ls~~E~~~l~~sa~~i~~~~~~ 311 (320)
T Consensus 314 ~~~e~~v~ii~ai~~~~~~~~~vNV~N~G~I~nLP~d~vVEvp~~Vd~~Gi~P~~vg~lP~~~~~L~~~~~~~e~LtveA 393 (437)
T cd05298 314 VHGEYIVDLAASIAYNTKERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVVGKIPTFYKGLMEQQVAYEKLLVEA 393 (437)
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 32899999999985299857999858998578999986799888976998531416989989999999999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254781048|r 312 CT 313 (320)
Q Consensus 312 ~~ 313 (320)
T Consensus 394 al 395 (437)
T cd05298 394 YL 395 (437)
T ss_pred HH
T ss_conf 99