>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

Probab=95.39 E-value=0.17 Score=29.80 Aligned_cols=116 Identities=21% Similarity=0.289 Sum_probs=67.2 Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCC--EEEEEECCC-------CCHHHHHHHHHHHCCCCCCCCEEEECCC-HHHHCC Q ss_conf 987289988981368999999957998--699996578-------8128988307620544688756852697-488378 Q gi|254781048|r 2 KSNKIALIGSGMIGGTLAHLAVLKKLG--DVVLLDIVD-------GMPRGKALDIAESSPVEGFGAQLCGTSD-YSDIAE 71 (320) Q Consensus 2 k~~KV~IIGaG~VG~~~a~~~~~~~l~--ei~L~D~~~-------~~~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~~ 71 (320) T Consensus 24 ~d~riv~~GAGsAg~gia~ll~~~g~~~~~i~lvD~~GLl~~~r~d~~~~~k~~~a~~-----~~~~~~-~~~l~e~v~~ 97 (226) T cd05311 24 EEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKE-----TNPEKT-GGTLKEALKG 97 (226) T ss_pred CCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH-----HCCCCC-CCCHHHHHCC T ss_conf 0307999876899999999999827760267999367852478864144999999987-----233566-6879998377 Q ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC-HHHHHHHHHHCCCCHHHHHHHC Q ss_conf 9789995566667655746789988999999997654126674088714842-0789999884499865611000 Q gi|254781048|r 72 ADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPL-DAMVWALQKFSGLPSHMVVGMA 145 (320) Q Consensus 72 aDivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPv-Dv~~~~~~~~sg~~~~rViG~G 145 (320) T Consensus 98 ~~vLIG~S~----~g~-----F--t~evv~~M-------~~~PiIFaLSNPt~E~tpe~a~~~-G---~ai~AtG 150 (226) T cd05311 98 ADVFIGVSR----PGV-----V--KKEMIKKM-------AKDPIVFALANPVPEIWPEEAKEA-G---ADIVATG 150 (226) T ss_pred CCEEEECCC----CCC-----C--CHHHHHHH-------CCCCEEEECCCCCCCCCHHHHHHH-C---CCEEECC T ss_conf 757997268----997-----7--99999974-------779889878899764899999872-7---7089549

HHsearch alignment for GI: 254781048 and conserved domain: cd05311