HHsearch alignment for GI: 254781048 and conserved domain: pfam01488

>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=97.62  E-value=0.00038  Score=47.03  Aligned_cols=105  Identities=18%  Similarity=0.203  Sum_probs=70.2

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCC-HHHHCCCCEEEEECC
Q ss_conf             9872899889813689999999579986999965788128988307620544688756852697-488378978999556
Q gi|254781048|r    2 KSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSD-YSDIAEADVCIVTAG   80 (320)
Q Consensus         2 k~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~~aDivVitag   80 (320)
T Consensus        11 ~~~~vlVIGaG~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~------~~~~~~~~~~~l~~~l~~~DivI~aT~   84 (134)
T pfam01488        11 KGKKVLLIGAGEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFG------GEEVEALPLDELEELLAEADIVISATS   84 (134)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC------CCCEEEEECHHHHHHHHHCCEEEEECC
T ss_conf             48989999960999999999997599889995475789999999849------972589851354413631999999259


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHH
Q ss_conf             666765574678998899999999765412667408871484207899
Q gi|254781048|r   81 IPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVW  128 (320)
Q Consensus        81 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~  128 (320)
T Consensus        85 s~~~-ii~~~~~------------~---~~~~~~~iiDLavPrnvd~~  116 (134)
T pfam01488        85 APTP-IITKEMV------------E---EALKGLLFVDIAVPRDIEPE  116 (134)
T ss_pred             CCCC-EECHHHH------------H---HCCCCEEEEEECCCCCCCHH
T ss_conf             9973-6489999------------7---44398599983478886654