HHsearch alignment for GI: 254781048 and conserved domain: pfam02254

>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.

Probab=95.80  E-value=0.02  Score=35.78  Aligned_cols=94  Identities=22%  Similarity=0.289  Sum_probs=55.8

Q ss_pred             EEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEE-CCC---HH--HHCCCCEEEEEC
Q ss_conf             899889813689999999579986999965788128988307620544688756852-697---48--837897899955
Q gi|254781048|r    6 IALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCG-TSD---YS--DIAEADVCIVTA   79 (320)
Q Consensus         6 V~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~-~~d---~~--~l~~aDivVita   79 (320)
T Consensus         1 viI~G~g~~G~~la~~L~~~~--~v~vId~d~~~~~~~~~~~~~---------vi~GD~~~~~~L~~a~i~~a~~vi~~~   69 (115)
T pfam02254         1 IIIIGYGRVGRSLAEELREGG--PVVVIDKDPERVEELREEGVP---------VVVGDATDEEVLEEAGIEDADAVVAAT   69 (115)
T ss_pred             CEEECCCHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHCCCE---------EEEEECCCHHHHHHHCCCCCCEEEEEC
T ss_conf             999878889999999998089--999999987998778866986---------999956886678761920287999962


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEEECCCCHH
Q ss_conf             66667655746789988999999997654126674-08871484207
Q gi|254781048|r   80 GIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNS-FVICITNPLDA  125 (320)
Q Consensus        80 g~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~-i~ivvtNPvDv  125 (320)
T Consensus        70 ~~d-----------~~n~~~~----~~~r~~~~~~~iiar~~~~~~~  101 (115)
T pfam02254        70 GDD-----------EANILIV----LLARELNPAKKIIARANDPEHA  101 (115)
T ss_pred             CCH-----------HHHHHHH----HHHHHHCCCCEEEEEECCHHHH
T ss_conf             984-----------9999999----9999978998099998789999