HHsearch alignment for GI: 254781048 and conserved domain: pfam02423
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=97.10 E-value=0.0047 Score=39.91 Aligned_cols=73 Identities=15% Similarity=0.251 Sum_probs=52.1
Q ss_pred CCEEEEECCCCHHHHHHH-HHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHH-HHCCCCEEEEECC
Q ss_conf 872899889813689999-99957998699996578812898830762054468875685269748-8378978999556
Q gi|254781048|r 3 SNKIALIGSGMIGGTLAH-LAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYS-DIAEADVCIVTAG 80 (320)
Q Consensus 3 ~~KV~IIGaG~VG~~~a~-~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~-~l~~aDivVitag 80 (320)
T Consensus 129 a~~l~iiGaG~QA~~~l~al~~v~~i~~v~v~~r~~~~~~~f~~~~~~~------~~~v~~~~~~~~av~~ADIIvtaT~ 202 (312)
T pfam02423 129 ASTLAIIGAGAQAEFQAEALSAVLPIEEIRIYDRDPEAAEKFARNLQGK------GFEIVACTSAEEAVEGADIVVTVTP 202 (312)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC------CCCEEEECCHHHHHHCCCEEEEEEC
T ss_conf 7579996462538999999996199768999968989999999999834------9965994899999714998999735
Q ss_pred C
Q ss_conf 6
Q gi|254781048|r 81 I 81 (320)
Q Consensus 81 ~ 81 (320)
T Consensus 203 s 203 (312)
T pfam02423 203 D 203 (312)
T ss_pred C
T ss_conf 9