HHsearch alignment for GI: 254781049 and conserved domain: COG0074
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion].
Probab=95.63 E-value=0.2 Score=29.14 Aligned_cols=132 Identities=17% Similarity=0.317 Sum_probs=93.8
Q ss_pred HCCC--CEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCC-CHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 5398--6442288179995550368999999996589962488427888-989999999998619986589996358613
Q gi|254781049|r 257 QHNL--SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA-DQDKVAAAFKIITSDSSVKGILINIFGGIM 333 (398)
Q Consensus 257 ~~~l--~yv~LdG~Ig~~vnGaGlamatmD~i~~~Gg~pANFlD~gG~a-~~e~~~~a~~~il~~~~vk~iliNifGGI~ 333 (398)
T Consensus 134 kiGimp~~i~~~G~IGiVSrSGTLTyE~~~qlt~~G~GqS~~IGiGGDpi~Gt~fid~L~~fe~Dp~T~~ivm--iGEiG 211 (293)
T COG0074 134 KIGIMPGNIYKPGNIGIVSRSGTLTYEAVSQLTEAGLGQSTAIGIGGDPIPGTSFIDALEMFEADPETEAIVM--IGEIG 211 (293)
T ss_pred EEEECHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEE--EECCC
T ss_conf 3510523405788569996686639999999976388558999857887688159999998645867407999--92679
Q ss_pred -HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH--------------------HHHCCCCEEEECCHHHHHHHHH
Q ss_conf -2899999999999972999879997489858999999--------------------9976995899499899999999
Q gi|254781049|r 334 -RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL--------------------IAESGLNVITAIDLDDAAQKIV 392 (398)
Q Consensus 334 -~cd~vA~gii~a~~~~~~~~pivvRl~Gtn~~~g~~i--------------------l~~~g~~~~~~~~~~~A~~~~v 392 (398)
T Consensus 212 G~aEe~AA~~i~~---~~~~KPVVa~iaG~tap~gkrmGhaGaiv~~~~gta~~Ki~al~~aGv~v--~etp~~l~~~l~ 286 (293)
T COG0074 212 GPAEEEAAEYIKA---NATRKPVVAYIAGRTAPEGKRMGHAGAIVSGGKGTAESKIAALEAAGVKV--AETPAELGELLL 286 (293)
T ss_pred CCHHHHHHHHHHH---HCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEE--CCCHHHHHHHHH
T ss_conf 9389999999996---34689869998436798233012103433078765899999999759741--179999999999
Q ss_pred HHH
Q ss_conf 985
Q gi|254781049|r 393 HAV 395 (398)
Q Consensus 393 ~~~ 395 (398)
T Consensus 287 ~vl 289 (293)
T COG0074 287 EVL 289 (293)
T ss_pred HHH
T ss_conf 986