HHsearch alignment for GI: 254781049 and conserved domain: COG0458

>COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism].

Probab=98.73  E-value=2.2e-07  Score=68.31  Aligned_cols=101  Identities=22%  Similarity=0.283  Sum_probs=82.4

Q ss_pred             HHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf             99999998689888815747999999999872998699971213687656565567777777079958999999999986
Q gi|254781049|r    7 QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI   86 (398)
Q Consensus         7 qaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~i   86 (398)
T Consensus       119 ~fke~m~eigi~~P-~~~~~~~~e~~~~~~~ig~Pv-IVrP~~~lGG~--------------G~~i~~n~eel~~~~~~~  182 (400)
T COG0458         119 LFKEAMREIGIPVP-SRIAHSVEEADEIADEIGYPV-IVKPSFGLGGS--------------GGGIAYNEEELEEIIEEG  182 (400)
T ss_pred             HHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHCCCCE-EEECCCCCCCC--------------CEEEEECHHHHHHHHHHC
T ss_conf             99999998399988-412356777765576369977-98068578887--------------516871899999998732


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEE
Q ss_conf             187654421222224433011034555650589999983477804899
Q gi|254781049|r   87 LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI  134 (398)
Q Consensus        87 lg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii  134 (398)
T Consensus       183 l~~-----------s~~~~vl~eesi~G~ke~e~ev~rd~~~n~ivvc  219 (400)
T COG0458         183 LRA-----------SPVEEVLIEESIIGWKEFEYEVVRDGKDNCIVVC  219 (400)
T ss_pred             CCC-----------CCCCCCEEEEEECCCEEEEEEEEEECCCCEEEEE
T ss_conf             244-----------7642001244216856999999983799879998