HHsearch alignment for GI: 254781049 and conserved domain: PRK00696
>PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional.
Probab=100.00 E-value=0 Score=1038.67 Aligned_cols=388 Identities=59% Similarity=0.939 Sum_probs=385.4
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf 98657999999998689888815747999999999872998699971213687656565567777777079958999999
Q gi|254781049|r 1 MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI 80 (398)
Q Consensus 1 M~L~EyqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~ 80 (398)
T Consensus 1 M~LhEyqaKell~~~gIpvp~g~v~~~~~ea~~~~~~l~~~~~VvKAQV~aGGRGKa----------GGVk~~~s~~ea~ 70 (388)
T PRK00696 1 MNLHEYQAKELLAEYGVPVPRGYVAFTPEEAVEAAEELGGPVWVVKAQVHAGGRGKA----------GGVKVAKSKEEVR 70 (388)
T ss_pred CCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCC----------CEEEEECCHHHHH
T ss_conf 963489999999986998999737799999999999829995899980545888868----------6079908999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECC
Q ss_conf 99998618765442122222443301103455565058999998347780489984478840245557483122033214
Q gi|254781049|r 81 SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160 (398)
Q Consensus 81 ~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id 160 (398)
T Consensus 71 ~~a~~ilg~~lvT~QTg~~G~~V~~vlvee~~~i~~E~Ylsi~~DR~~~~~~~i~S~~GG~dIEevA~~~Pe~I~k~~id 150 (388)
T PRK00696 71 AAAEEILGKDLVTHQTGPEGQPVNRLLIEEGADIAKELYLSAVVDRATRRVVFMASTEGGMEIEEVAEETPEKIHKVAVD 150 (388)
T ss_pred HHHHHHHCCCCCEECCCCCCCEEEEEEEEECCCHHHHEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEECC
T ss_conf 99999856774210158888444799987516612406899998647785799998887987999865291238999757
Q ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHH
Q ss_conf 44578957888788751988899885999999998999955975102326799059967994001321573556410278
Q gi|254781049|r 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240 (398)
Q Consensus 161 ~~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg~vvAlDAKi~iDDnA~fR~~~~~ 240 (398)
T Consensus 151 p~~gl~~~~~r~i~~~lgl~~~~~~~~~~ii~~Ly~~F~~~Da~LvEINPLv~t~dg~~ialDaKv~iDDNAlfR~~~i~ 230 (388)
T PRK00696 151 PLVGLQPYQAREIAFKLGLPGEQVKQAVKIFMGLYKAFVEKDASLVEINPLVVTKDGDLLALDAKITFDDNALFRHPDIA 230 (388)
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCEEEEEEEEECCCCHHHCCHHHH
T ss_conf 77798999999999982999999999999999999999965974256124268689978998889841675233186667
Q ss_pred HHHCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 63100015622245775398644228817999555036899999999658996248842788898999999999861998
Q gi|254781049|r 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSS 320 (398)
Q Consensus 241 ~~~d~~~~~~~E~~A~~~~l~yv~LdG~Ig~~vnGaGlamatmD~i~~~Gg~pANFlD~gG~a~~e~~~~a~~~il~~~~ 320 (398)
T Consensus 231 ~~rd~~~ed~~E~~A~~~~lnyv~LdG~IG~mvNGAGLaMaTmD~i~~~Gg~pANFLDvGG~a~~e~v~~a~~ii~~d~~ 310 (388)
T PRK00696 231 ALRDPSQEDPREAEASKFDLNYVALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVGGGATKERVTEAFKIILSDPN 310 (388)
T ss_pred HCCCCCCCCHHHHHHHHCCCCEEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 32687648978999988697359745769999747644413589999759985425634899889999999999866999
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCC
Q ss_conf 658999635861328999999999999729998799974898589999999976995899499899999999985069
Q gi|254781049|r 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398 (398)
Q Consensus 321 vk~iliNifGGI~~cd~vA~gii~a~~~~~~~~pivvRl~Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~~k~v 398 (398)
T Consensus 311 vk~IliNIfGGI~rcd~vA~giv~A~~~~~~~~PiVvRl~Gtn~e~g~~iL~~sgl~i~~~~~l~eAa~~aV~~~~g~ 388 (388)
T PRK00696 311 VKAILVNIFGGIMRCDVIAEGIVAAVKEVGVKVPLVVRLEGTNVELGKKILAESGLPIIAADSLMDAAQKVVAAVAGK 388 (388)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCC
T ss_conf 509999936882439999999999999649998789990678879999999978997487078999999999973489